Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC104390.1-201ENST00000555663 520 ntBASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 AC010240.3-201ENST00000607688 395 ntBASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.63■□□□□ 0.73
SCN4BQ8IWT1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 AL136038.3-201ENST00000561909 1096 ntBASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 Z98044.1-201ENST00000632503 1764 ntBASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.62■□□□□ 0.73
SCN4BQ8IWT1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 MTMR9LP-203ENST00000426597 1545 ntBASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCN4BQ8IWT1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 SPDYE13P-201ENST00000445314 798 ntBASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.6■□□□□ 0.73
SCN4BQ8IWT1 AC079602.3-201ENST00000623931 403 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms