Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL23A1Q86Y22 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
COL23A1Q86Y22 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL23A1Q86Y22 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL23A1Q86Y22 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL23A1Q86Y22 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC23.32■■□□□ 1.32
COL23A1Q86Y22 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC23.32■■□□□ 1.32
COL23A1Q86Y22 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
COL23A1Q86Y22 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL23A1Q86Y22 AC083906.6-201ENST00000641366 219 ntBASIC23.32■■□□□ 1.32
COL23A1Q86Y22 AC079781.4-201ENST00000641908 219 ntBASIC23.32■■□□□ 1.32
COL23A1Q86Y22 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
COL23A1Q86Y22 Z82202.1-201ENST00000623446 1880 ntBASIC23.32■■□□□ 1.32
COL23A1Q86Y22 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
COL23A1Q86Y22 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.31■■□□□ 1.32
COL23A1Q86Y22 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
COL23A1Q86Y22 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL23A1Q86Y22 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC23.31■■□□□ 1.32
COL23A1Q86Y22 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL23A1Q86Y22 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.31■■□□□ 1.32
COL23A1Q86Y22 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
COL23A1Q86Y22 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 DNAJB3-201ENST00000446806 729 ntBASIC23.3■■□□□ 1.32
COL23A1Q86Y22 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 AC040169.1-201ENST00000565382 521 ntBASIC23.3■■□□□ 1.32
COL23A1Q86Y22 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC23.3■■□□□ 1.32
COL23A1Q86Y22 HLA-J-201ENST00000462773 1622 ntBASIC23.3■■□□□ 1.32
COL23A1Q86Y22 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 PMP22-202ENST00000395936 816 ntTSL 3 BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 LBH-203ENST00000404397 543 ntTSL 4 BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 DNAJB3-202ENST00000449667 1266 ntBASIC23.29■■□□□ 1.32
COL23A1Q86Y22 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 RPS15-207ENST00000591032 550 ntTSL 3 BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL23A1Q86Y22 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL23A1Q86Y22 INTS4P1-201ENST00000438455 1935 ntBASIC23.28■■□□□ 1.32
COL23A1Q86Y22 LINC01521-201ENST00000504184 1943 ntBASIC23.28■■□□□ 1.32
COL23A1Q86Y22 AC112777.1-201ENST00000540175 1423 ntBASIC23.28■■□□□ 1.32
COL23A1Q86Y22 AP005117.1-201ENST00000584346 1413 ntBASIC23.28■■□□□ 1.32
COL23A1Q86Y22 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC23.28■■□□□ 1.32
COL23A1Q86Y22 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
COL23A1Q86Y22 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC23.28■■□□□ 1.32
COL23A1Q86Y22 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC23.28■■□□□ 1.32
COL23A1Q86Y22 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC23.28■■□□□ 1.32
COL23A1Q86Y22 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC23.28■■□□□ 1.32
COL23A1Q86Y22 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL23A1Q86Y22 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL23A1Q86Y22 AL357033.4-201ENST00000617703 1807 ntBASIC23.28■■□□□ 1.32
COL23A1Q86Y22 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.28■■□□□ 1.32
COL23A1Q86Y22 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL23A1Q86Y22 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL23A1Q86Y22 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 TCF3P1-201ENST00000423021 1937 ntBASIC23.27■■□□□ 1.32
COL23A1Q86Y22 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 PNMT-203ENST00000581428 677 ntTSL 2 BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
COL23A1Q86Y22 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms