Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 AC073508.3-201ENST00000619697 1419 ntBASIC12.31□□□□□ -0.44
SCXQ7RTU7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 AC012313.1-201ENST00000593393 3059 ntBASIC12.31□□□□□ -0.44
SCXQ7RTU7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 TSPY14P-201ENST00000303979 915 ntBASIC12.31□□□□□ -0.44
SCXQ7RTU7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 AC004951.3-201ENST00000418645 1148 ntBASIC12.31□□□□□ -0.44
SCXQ7RTU7 ECEL1P2-202ENST00000465689 757 ntBASIC12.31□□□□□ -0.44
SCXQ7RTU7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 AC128688.1-201ENST00000487626 519 ntBASIC12.31□□□□□ -0.44
SCXQ7RTU7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 EGLN1P1-201ENST00000531623 762 ntBASIC12.31□□□□□ -0.44
SCXQ7RTU7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
SCXQ7RTU7 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 AL049812.1-201ENST00000432563 2267 ntBASIC12.31□□□□□ -0.44
SCXQ7RTU7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SCXQ7RTU7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 KRT8P8-201ENST00000434750 1448 ntBASIC12.3□□□□□ -0.44
SCXQ7RTU7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 FAM207BP-201ENST00000447172 505 ntBASIC12.3□□□□□ -0.44
SCXQ7RTU7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 AC010203.1-204ENST00000548782 407 ntBASIC12.3□□□□□ -0.44
SCXQ7RTU7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 AP000692.2-201ENST00000608391 879 ntBASIC12.3□□□□□ -0.44
SCXQ7RTU7 TCF3P1-201ENST00000423021 1937 ntBASIC12.3□□□□□ -0.44
SCXQ7RTU7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 AC125437.2-201ENST00000625180 2167 ntBASIC12.3□□□□□ -0.44
SCXQ7RTU7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 AP001271.2-201ENST00000624018 1556 ntBASIC12.3□□□□□ -0.44
SCXQ7RTU7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SCXQ7RTU7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SCXQ7RTU7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SCXQ7RTU7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SCXQ7RTU7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SCXQ7RTU7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 AL133373.2-201ENST00000623187 2828 ntBASIC12.29□□□□□ -0.44
SCXQ7RTU7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SCXQ7RTU7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCXQ7RTU7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SCXQ7RTU7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.29□□□□□ -0.44
SCXQ7RTU7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms