Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC62Q6P9F0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC62Q6P9F0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC62Q6P9F0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC62Q6P9F0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC62Q6P9F0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CCDC62Q6P9F0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC62Q6P9F0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC62Q6P9F0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.89■□□□□ 0.94
CCDC62Q6P9F0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 AC026396.1-201ENST00000419388 421 ntBASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 TPM4P1-201ENST00000436100 807 ntBASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC62Q6P9F0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 DRAXINP1-201ENST00000437611 948 ntBASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 TPSP2-201ENST00000561760 610 ntBASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 Z83836.1-201ENST00000624605 1642 ntBASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC62Q6P9F0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms