Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CASC4Q6P4E1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
CASC4Q6P4E1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CASC4Q6P4E1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 AC011298.2-201ENST00000617989 482 ntBASIC19.01■□□□□ 0.63
CASC4Q6P4E1 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CASC4Q6P4E1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19■□□□□ 0.63
CASC4Q6P4E1 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19■□□□□ 0.63
CASC4Q6P4E1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CASC4Q6P4E1 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19■□□□□ 0.63
CASC4Q6P4E1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CASC4Q6P4E1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 FAM201B-201ENST00000458407 597 ntBASIC19■□□□□ 0.63
CASC4Q6P4E1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 AF186192.3-201ENST00000583427 947 ntBASIC19■□□□□ 0.63
CASC4Q6P4E1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19■□□□□ 0.63
CASC4Q6P4E1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19■□□□□ 0.63
CASC4Q6P4E1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CASC4Q6P4E1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
CASC4Q6P4E1 AL499627.1-201ENST00000569373 2188 ntBASIC19■□□□□ 0.63
CASC4Q6P4E1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CASC4Q6P4E1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19■□□□□ 0.63
CASC4Q6P4E1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19■□□□□ 0.63
CASC4Q6P4E1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 BICD1-207ENST00000551848 1962 ntBASIC18.99■□□□□ 0.63
CASC4Q6P4E1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.99■□□□□ 0.63
CASC4Q6P4E1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 MTMR9LP-203ENST00000426597 1545 ntBASIC18.99■□□□□ 0.63
CASC4Q6P4E1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CASC4Q6P4E1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 AC079598.2-202ENST00000546624 1451 ntBASIC18.98■□□□□ 0.63
CASC4Q6P4E1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CASC4Q6P4E1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms