Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 ABHD17AP1-201ENST00000358206 933 ntBASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 KRT16P5-201ENST00000455284 522 ntBASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 RPPH1-201ENST00000516869 333 ntBASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TMEM53Q6P2H8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 CROCCP3-202ENST00000420820 1947 ntBASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TMEM53Q6P2H8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 AC103702.1-201ENST00000548801 2630 ntBASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 AC142381.4-202ENST00000563973 229 ntBASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TMEM53Q6P2H8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.02■□□□□ 0.32
TMEM53Q6P2H8 PRORSD1P-201ENST00000295112 541 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms