Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 SOX15-203ENST00000570788 1093 ntBASIC17.94■□□□□ 0.46
RNF220Q5VTB9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 AD000864.1-201ENST00000624076 2295 ntBASIC17.94■□□□□ 0.46
RNF220Q5VTB9 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF220Q5VTB9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.93■□□□□ 0.46
RNF220Q5VTB9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF220Q5VTB9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 AL121829.2-201ENST00000620908 328 ntBASIC17.92■□□□□ 0.46
RNF220Q5VTB9 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF220Q5VTB9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF220Q5VTB9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms