Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 AC092597.1-201ENST00000487352 616 ntBASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 FGF14-AS2-201ENST00000606448 1074 ntBASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 AC083849.1-201ENST00000615227 514 ntBASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TTC39AQ5SRH9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TTC39AQ5SRH9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TTC39AQ5SRH9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
TTC39AQ5SRH9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TTC39AQ5SRH9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 ISCU-203ENST00000431221 799 ntTSL 2 BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.64■■□□□ 1.21
TTC39AQ5SRH9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.63■■□□□ 1.21
TTC39AQ5SRH9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC39AQ5SRH9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.63■■□□□ 1.21
TTC39AQ5SRH9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TTC39AQ5SRH9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC39AQ5SRH9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.63■■□□□ 1.21
TTC39AQ5SRH9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC22.63■■□□□ 1.21
TTC39AQ5SRH9 AL121956.5-201ENST00000625261 221 ntBASIC22.63■■□□□ 1.21
TTC39AQ5SRH9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC39AQ5SRH9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TTC39AQ5SRH9 KRT8P50-201ENST00000562022 1438 ntBASIC22.63■■□□□ 1.21
TTC39AQ5SRH9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
TTC39AQ5SRH9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC39AQ5SRH9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TTC39AQ5SRH9 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.63■■□□□ 1.21
TTC39AQ5SRH9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TTC39AQ5SRH9 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 HBZP1-201ENST00000354915 429 ntBASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 FAM86EP-206ENST00000510506 987 ntBASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 KRT18P41-201ENST00000518924 1277 ntBASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 ZNF444P1-201ENST00000559497 298 ntBASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 AC079602.3-201ENST00000623931 403 ntBASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 AL358472.4-201ENST00000633140 710 ntBASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TTC39AQ5SRH9 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms