Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC178Q5BJE1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 AL359075.1-203ENST00000462729 1002 ntBASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC178Q5BJE1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 AC018445.3-201ENST00000624177 1945 ntBASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 AC087289.5-201ENST00000586076 3175 ntBASIC21.73■■□□□ 1.07
CCDC178Q5BJE1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 AL031598.1-201ENST00000561511 1773 ntBASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 KRT18P38-201ENST00000449496 1282 ntBASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 KRT18P35-201ENST00000510488 1269 ntBASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC178Q5BJE1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 SPDYE15P-201ENST00000424157 909 ntBASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 AL445228.2-201ENST00000605589 952 ntBASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 AL157888.1-201ENST00000631930 593 ntBASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 ANO7L1-203ENST00000602586 1720 ntBASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC178Q5BJE1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms