Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM71Q2Q1W2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 TSPY12P-201ENST00000421279 868 ntBASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM71Q2Q1W2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 AL357033.4-201ENST00000617703 1807 ntBASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 REXO1L6P-202ENST00000619970 1078 ntBASIC20.27■□□□□ 0.84
TRIM71Q2Q1W2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM71Q2Q1W2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM71Q2Q1W2 HLA-A-201ENST00000376802 1334 ntBASIC20.27■□□□□ 0.83
TRIM71Q2Q1W2 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 AL662844.1-201ENST00000546340 181 ntBASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 MTMR9LP-203ENST00000426597 1545 ntBASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 HEIH-201ENST00000623091 1652 ntBASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
TRIM71Q2Q1W2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 AL158211.5-201ENST00000623583 2518 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms