Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 IGHGP-201ENST00000390555 1178 ntBASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 AP005901.3-202ENST00000581653 237 ntBASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 PKD1P6-201ENST00000343738 4769 ntBASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 LINC00167-201ENST00000530583 1419 ntBASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.69■■□□□ 1.06
SHROOM1Q2M3G4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 TSPY19P-201ENST00000418461 509 ntBASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 TSPY18P-201ENST00000441642 509 ntBASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SHROOM1Q2M3G4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 NUS1P1-201ENST00000446295 882 ntBASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 FDX1P1-201ENST00000449115 551 ntBASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 AC009078.2-202ENST00000463353 338 ntBASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 GPR32P1-201ENST00000601788 811 ntBASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 AL499627.1-201ENST00000569373 2188 ntBASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SHROOM1Q2M3G4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 AP000347.1-202ENST00000435868 847 ntBASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 AC079781.3-201ENST00000449110 356 ntBASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 AC111152.3-201ENST00000569699 673 ntBASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.66■■□□□ 1.06
SHROOM1Q2M3G4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms