Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYPL1Q16563 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYPL1Q16563 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYPL1Q16563 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYPL1Q16563 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYPL1Q16563 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.34■□□□□ 0.37
SYPL1Q16563 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYPL1Q16563 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYPL1Q16563 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYPL1Q16563 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SYPL1Q16563 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SYPL1Q16563 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYPL1Q16563 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYPL1Q16563 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYPL1Q16563 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SYPL1Q16563 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SYPL1Q16563 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYPL1Q16563 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.34■□□□□ 0.37
SYPL1Q16563 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.34■□□□□ 0.37
SYPL1Q16563 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYPL1Q16563 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYPL1Q16563 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.34■□□□□ 0.37
SYPL1Q16563 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
SYPL1Q16563 MFAP1P1-201ENST00000442257 1255 ntBASIC17.34■□□□□ 0.37
SYPL1Q16563 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.34■□□□□ 0.37
SYPL1Q16563 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYPL1Q16563 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.34■□□□□ 0.37
SYPL1Q16563 AC096733.2-201ENST00000609937 1394 ntBASIC17.34■□□□□ 0.37
SYPL1Q16563 AL133373.2-201ENST00000623187 2828 ntBASIC17.34■□□□□ 0.37
SYPL1Q16563 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.34■□□□□ 0.37
SYPL1Q16563 MYC-208ENST00000641036 567 ntBASIC17.34■□□□□ 0.37
SYPL1Q16563 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYPL1Q16563 NOC2LP1-202ENST00000452600 2235 ntBASIC17.33■□□□□ 0.37
SYPL1Q16563 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYPL1Q16563 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.33■□□□□ 0.37
SYPL1Q16563 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.33■□□□□ 0.37
SYPL1Q16563 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SYPL1Q16563 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SYPL1Q16563 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.33■□□□□ 0.37
SYPL1Q16563 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYPL1Q16563 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SYPL1Q16563 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYPL1Q16563 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYPL1Q16563 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SYPL1Q16563 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYPL1Q16563 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.33■□□□□ 0.36
SYPL1Q16563 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYPL1Q16563 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.33■□□□□ 0.36
SYPL1Q16563 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SYPL1Q16563 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYPL1Q16563 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYPL1Q16563 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.33■□□□□ 0.36
SYPL1Q16563 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.33■□□□□ 0.36
SYPL1Q16563 AC233702.5-201ENST00000584107 538 ntBASIC17.33■□□□□ 0.36
SYPL1Q16563 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.33■□□□□ 0.36
SYPL1Q16563 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYPL1Q16563 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.33■□□□□ 0.36
SYPL1Q16563 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
SYPL1Q16563 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SYPL1Q16563 AL049637.2-201ENST00000641778 930 ntBASIC17.33■□□□□ 0.36
SYPL1Q16563 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.33■□□□□ 0.36
SYPL1Q16563 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYPL1Q16563 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SYPL1Q16563 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.33■□□□□ 0.36
SYPL1Q16563 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYPL1Q16563 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYPL1Q16563 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYPL1Q16563 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.33■□□□□ 0.36
SYPL1Q16563 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYPL1Q16563 AL109659.2-201ENST00000606809 1674 ntBASIC17.32■□□□□ 0.36
SYPL1Q16563 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYPL1Q16563 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYPL1Q16563 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYPL1Q16563 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SYPL1Q16563 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SYPL1Q16563 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYPL1Q16563 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SYPL1Q16563 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SYPL1Q16563 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.32■□□□□ 0.36
SYPL1Q16563 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYPL1Q16563 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYPL1Q16563 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYPL1Q16563 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.32■□□□□ 0.36
SYPL1Q16563 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYPL1Q16563 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYPL1Q16563 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.32■□□□□ 0.36
SYPL1Q16563 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYPL1Q16563 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SYPL1Q16563 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYPL1Q16563 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.32■□□□□ 0.36
SYPL1Q16563 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYPL1Q16563 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.32■□□□□ 0.36
SYPL1Q16563 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.32■□□□□ 0.36
SYPL1Q16563 AC012618.2-201ENST00000428058 849 ntBASIC17.32■□□□□ 0.36
SYPL1Q16563 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SYPL1Q16563 AC097488.1-201ENST00000507834 756 ntBASIC17.32■□□□□ 0.36
SYPL1Q16563 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.32■□□□□ 0.36
SYPL1Q16563 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.32■□□□□ 0.36
SYPL1Q16563 DGCR10-201ENST00000609839 495 ntBASIC17.32■□□□□ 0.36
SYPL1Q16563 REXO1L10P-201ENST00000615707 1290 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms