Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.3■■□□□ 1
SREBF2Q12772 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.3■■□□□ 1
SREBF2Q12772 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SREBF2Q12772 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SREBF2Q12772 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SREBF2Q12772 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.29■■□□□ 1
SREBF2Q12772 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.29■■□□□ 1
SREBF2Q12772 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SREBF2Q12772 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.29■■□□□ 1
SREBF2Q12772 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SREBF2Q12772 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.29■■□□□ 1
SREBF2Q12772 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SREBF2Q12772 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.29■■□□□ 1
SREBF2Q12772 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SREBF2Q12772 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SREBF2Q12772 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SREBF2Q12772 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.29■■□□□ 1
SREBF2Q12772 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC21.29■■□□□ 1
SREBF2Q12772 AC009533.2-201ENST00000543664 586 ntBASIC21.29■■□□□ 1
SREBF2Q12772 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.29■■□□□ 1
SREBF2Q12772 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.29■■□□□ 1
SREBF2Q12772 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
SREBF2Q12772 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.29■■□□□ 1
SREBF2Q12772 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.29■■□□□ 1
SREBF2Q12772 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SREBF2Q12772 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.29■■□□□ 1
SREBF2Q12772 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.29■■□□□ 1
SREBF2Q12772 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.29■■□□□ 1
SREBF2Q12772 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.29■■□□□ 1
SREBF2Q12772 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SREBF2Q12772 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SREBF2Q12772 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SREBF2Q12772 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
SREBF2Q12772 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
SREBF2Q12772 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SREBF2Q12772 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.28■■□□□ 1
SREBF2Q12772 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.28■■□□□ 1
SREBF2Q12772 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SREBF2Q12772 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.28■■□□□ 1
SREBF2Q12772 RNA5SP416-201ENST00000516838 111 ntBASIC21.28■■□□□ 1
SREBF2Q12772 RNA5SP415-201ENST00000517246 115 ntBASIC21.28■■□□□ 1
SREBF2Q12772 OR7E14P-202ENST00000530490 1290 ntBASIC21.28■■□□□ 1
SREBF2Q12772 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.28■■□□□ 1
SREBF2Q12772 AC005336.2-201ENST00000593183 939 ntBASIC21.28■■□□□ 1
SREBF2Q12772 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.28■■□□□ 1
SREBF2Q12772 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
SREBF2Q12772 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SREBF2Q12772 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.28■■□□□ 1
SREBF2Q12772 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.27■■□□□ 1
SREBF2Q12772 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SREBF2Q12772 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SREBF2Q12772 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.27■■□□□ 1
SREBF2Q12772 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.27■■□□□ 1
SREBF2Q12772 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.27■■□□□ 1
SREBF2Q12772 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.27■■□□□ 1
SREBF2Q12772 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.27■■□□□ 1
SREBF2Q12772 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.27■■□□□ 1
SREBF2Q12772 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.27■■□□□ 1
SREBF2Q12772 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SREBF2Q12772 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.27■■□□□ 1
SREBF2Q12772 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SREBF2Q12772 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.27■□□□□ 0.99
SREBF2Q12772 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SREBF2Q12772 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SREBF2Q12772 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SREBF2Q12772 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SREBF2Q12772 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SREBF2Q12772 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SREBF2Q12772 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SREBF2Q12772 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SREBF2Q12772 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SREBF2Q12772 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.26■□□□□ 0.99
SREBF2Q12772 AC004832.2-201ENST00000426397 482 ntBASIC21.26■□□□□ 0.99
SREBF2Q12772 SART3-203ENST00000546611 1184 ntBASIC21.26■□□□□ 0.99
SREBF2Q12772 AC002347.1-201ENST00000569543 541 ntBASIC21.26■□□□□ 0.99
SREBF2Q12772 PAM16-208ENST00000573553 722 ntTSL 2 BASIC21.26■□□□□ 0.99
SREBF2Q12772 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.26■□□□□ 0.99
SREBF2Q12772 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC21.26■□□□□ 0.99
SREBF2Q12772 AC008687.5-201ENST00000593746 558 ntBASIC21.26■□□□□ 0.99
SREBF2Q12772 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SREBF2Q12772 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SREBF2Q12772 AP005117.1-201ENST00000584346 1413 ntBASIC21.26■□□□□ 0.99
SREBF2Q12772 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.26■□□□□ 0.99
SREBF2Q12772 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.26■□□□□ 0.99
SREBF2Q12772 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SREBF2Q12772 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SREBF2Q12772 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SREBF2Q12772 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.25■□□□□ 0.99
SREBF2Q12772 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SREBF2Q12772 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SREBF2Q12772 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SREBF2Q12772 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SREBF2Q12772 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.25■□□□□ 0.99
SREBF2Q12772 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.25■□□□□ 0.99
SREBF2Q12772 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.25■□□□□ 0.99
SREBF2Q12772 MIR3197-201ENST00000582241 73 ntBASIC21.25■□□□□ 0.99
SREBF2Q12772 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SREBF2Q12772 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC21.25■□□□□ 0.99
SREBF2Q12772 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.25■□□□□ 0.99
SREBF2Q12772 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms