Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.85■□□□□ 0.77
CDR2Q01850 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR2Q01850 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.85■□□□□ 0.77
CDR2Q01850 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDR2Q01850 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.85■□□□□ 0.77
CDR2Q01850 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR2Q01850 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CDR2Q01850 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDR2Q01850 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.85■□□□□ 0.77
CDR2Q01850 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CDR2Q01850 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.85■□□□□ 0.77
CDR2Q01850 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR2Q01850 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR2Q01850 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR2Q01850 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR2Q01850 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR2Q01850 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR2Q01850 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CDR2Q01850 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CDR2Q01850 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
CDR2Q01850 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR2Q01850 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CDR2Q01850 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.85■□□□□ 0.77
CDR2Q01850 AC079598.2-202ENST00000546624 1451 ntBASIC19.85■□□□□ 0.77
CDR2Q01850 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDR2Q01850 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDR2Q01850 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR2Q01850 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDR2Q01850 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR2Q01850 LETM1P2-201ENST00000597330 2178 ntBASIC19.84■□□□□ 0.77
CDR2Q01850 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR2Q01850 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDR2Q01850 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CDR2Q01850 SNORA78-201ENST00000459373 127 ntBASIC19.84■□□□□ 0.77
CDR2Q01850 MIR4674-201ENST00000582457 87 ntBASIC19.84■□□□□ 0.77
CDR2Q01850 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDR2Q01850 AL023803.3-201ENST00000615559 522 ntBASIC19.84■□□□□ 0.77
CDR2Q01850 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.84■□□□□ 0.77
CDR2Q01850 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR2Q01850 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.84■□□□□ 0.77
CDR2Q01850 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.84■□□□□ 0.77
CDR2Q01850 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.84■□□□□ 0.77
CDR2Q01850 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CDR2Q01850 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR2Q01850 AL354751.1-201ENST00000412768 1863 ntBASIC19.84■□□□□ 0.77
CDR2Q01850 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR2Q01850 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDR2Q01850 AL390961.4-201ENST00000623958 2535 ntBASIC19.83■□□□□ 0.77
CDR2Q01850 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.83■□□□□ 0.77
CDR2Q01850 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CDR2Q01850 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDR2Q01850 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDR2Q01850 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CDR2Q01850 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CDR2Q01850 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDR2Q01850 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDR2Q01850 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CDR2Q01850 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.83■□□□□ 0.77
CDR2Q01850 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.83■□□□□ 0.77
CDR2Q01850 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CDR2Q01850 FITM1-202ENST00000559294 800 ntBASIC19.83■□□□□ 0.77
CDR2Q01850 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.83■□□□□ 0.77
CDR2Q01850 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDR2Q01850 AP000525.1-201ENST00000608286 694 ntBASIC19.83■□□□□ 0.77
CDR2Q01850 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.83■□□□□ 0.77
CDR2Q01850 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDR2Q01850 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CDR2Q01850 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDR2Q01850 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDR2Q01850 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDR2Q01850 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.83■□□□□ 0.76
CDR2Q01850 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.83■□□□□ 0.76
CDR2Q01850 MYLKP1-201ENST00000509077 1580 ntBASIC19.83■□□□□ 0.76
CDR2Q01850 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CDR2Q01850 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CDR2Q01850 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CDR2Q01850 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CDR2Q01850 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.82■□□□□ 0.76
CDR2Q01850 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 SLC25A1P2-201ENST00000430693 912 ntBASIC19.82■□□□□ 0.76
CDR2Q01850 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.82■□□□□ 0.76
CDR2Q01850 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.82■□□□□ 0.76
CDR2Q01850 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CDR2Q01850 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDR2Q01850 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms