Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDKL1Q00532 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL1Q00532 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL1Q00532 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL1Q00532 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDKL1Q00532 MFAP1P1-201ENST00000442257 1255 ntBASIC18.32■□□□□ 0.52
CDKL1Q00532 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.32■□□□□ 0.52
CDKL1Q00532 AC097488.1-201ENST00000507834 756 ntBASIC18.32■□□□□ 0.52
CDKL1Q00532 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.32■□□□□ 0.52
CDKL1Q00532 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.32■□□□□ 0.52
CDKL1Q00532 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.32■□□□□ 0.52
CDKL1Q00532 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.32■□□□□ 0.52
CDKL1Q00532 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL1Q00532 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDKL1Q00532 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDKL1Q00532 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL1Q00532 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKL1Q00532 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKL1Q00532 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKL1Q00532 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKL1Q00532 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKL1Q00532 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKL1Q00532 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKL1Q00532 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDKL1Q00532 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.31■□□□□ 0.52
CDKL1Q00532 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKL1Q00532 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.31■□□□□ 0.52
CDKL1Q00532 SLC25A1P4-201ENST00000567977 778 ntBASIC18.31■□□□□ 0.52
CDKL1Q00532 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKL1Q00532 AP005242.2-201ENST00000580065 1175 ntBASIC18.31■□□□□ 0.52
CDKL1Q00532 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.31■□□□□ 0.52
CDKL1Q00532 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
CDKL1Q00532 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CDKL1Q00532 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDKL1Q00532 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKL1Q00532 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKL1Q00532 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL1Q00532 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CDKL1Q00532 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKL1Q00532 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL1Q00532 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL1Q00532 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDKL1Q00532 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKL1Q00532 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL1Q00532 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDKL1Q00532 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.3■□□□□ 0.52
CDKL1Q00532 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.3■□□□□ 0.52
CDKL1Q00532 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.3■□□□□ 0.52
CDKL1Q00532 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL1Q00532 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.3■□□□□ 0.52
CDKL1Q00532 AP006294.2-201ENST00000641667 209 ntBASIC18.3■□□□□ 0.52
CDKL1Q00532 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL1Q00532 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL1Q00532 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL1Q00532 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDKL1Q00532 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDKL1Q00532 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL1Q00532 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CDKL1Q00532 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL1Q00532 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL1Q00532 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL1Q00532 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKL1Q00532 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.29■□□□□ 0.52
CDKL1Q00532 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL1Q00532 RCC2P3-201ENST00000418112 1537 ntBASIC18.29■□□□□ 0.52
CDKL1Q00532 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDKL1Q00532 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL1Q00532 AL109659.2-201ENST00000606809 1674 ntBASIC18.29■□□□□ 0.52
CDKL1Q00532 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL1Q00532 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKL1Q00532 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL1Q00532 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL1Q00532 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL1Q00532 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL1Q00532 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.29■□□□□ 0.52
CDKL1Q00532 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDKL1Q00532 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKL1Q00532 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL1Q00532 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL1Q00532 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.29■□□□□ 0.52
CDKL1Q00532 AP003071.4-201ENST00000562276 1284 ntBASIC18.29■□□□□ 0.52
CDKL1Q00532 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms