Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 OR8S1-201ENST00000310194 1080 ntBASIC21.55■■□□□ 1.04
HTRA3P83110 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HTRA3P83110 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.55■■□□□ 1.04
HTRA3P83110 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.55■■□□□ 1.04
HTRA3P83110 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.55■■□□□ 1.04
HTRA3P83110 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.55■■□□□ 1.04
HTRA3P83110 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HTRA3P83110 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.55■■□□□ 1.04
HTRA3P83110 GPR89P-201ENST00000407924 1495 ntBASIC21.55■■□□□ 1.04
HTRA3P83110 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HTRA3P83110 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
HTRA3P83110 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
HTRA3P83110 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HTRA3P83110 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HTRA3P83110 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.54■■□□□ 1.04
HTRA3P83110 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HTRA3P83110 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.54■■□□□ 1.04
HTRA3P83110 AL109659.2-201ENST00000606809 1674 ntBASIC21.54■■□□□ 1.04
HTRA3P83110 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HTRA3P83110 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HTRA3P83110 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HTRA3P83110 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
HTRA3P83110 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.54■■□□□ 1.04
HTRA3P83110 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.54■■□□□ 1.04
HTRA3P83110 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HTRA3P83110 AC093520.2-201ENST00000561830 333 ntBASIC21.54■■□□□ 1.04
HTRA3P83110 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.54■■□□□ 1.04
HTRA3P83110 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.54■■□□□ 1.04
HTRA3P83110 AJ011932.1-201ENST00000621707 465 ntBASIC21.54■■□□□ 1.04
HTRA3P83110 AL139288.1-201ENST00000623748 933 ntBASIC21.54■■□□□ 1.04
HTRA3P83110 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HTRA3P83110 SDHAP1-207ENST00000440850 2000 ntBASIC21.54■■□□□ 1.04
HTRA3P83110 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HTRA3P83110 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HTRA3P83110 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HTRA3P83110 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
HTRA3P83110 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTRA3P83110 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
HTRA3P83110 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HTRA3P83110 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTRA3P83110 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HTRA3P83110 KRT89P-201ENST00000620027 1478 ntBASIC21.53■■□□□ 1.04
HTRA3P83110 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
HTRA3P83110 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.53■■□□□ 1.04
HTRA3P83110 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTRA3P83110 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTRA3P83110 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HTRA3P83110 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HTRA3P83110 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.53■■□□□ 1.04
HTRA3P83110 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.53■■□□□ 1.04
HTRA3P83110 AC087641.1-201ENST00000557561 1021 ntBASIC21.53■■□□□ 1.04
HTRA3P83110 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HTRA3P83110 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC21.53■■□□□ 1.04
HTRA3P83110 AL359881.2-201ENST00000602973 570 ntBASIC21.53■■□□□ 1.04
HTRA3P83110 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.53■■□□□ 1.04
HTRA3P83110 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.53■■□□□ 1.04
HTRA3P83110 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
HTRA3P83110 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HTRA3P83110 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HTRA3P83110 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.52■■□□□ 1.04
HTRA3P83110 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.52■■□□□ 1.04
HTRA3P83110 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HTRA3P83110 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HTRA3P83110 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HTRA3P83110 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HTRA3P83110 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.52■■□□□ 1.04
HTRA3P83110 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.52■■□□□ 1.04
HTRA3P83110 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.52■■□□□ 1.04
HTRA3P83110 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.52■■□□□ 1.04
HTRA3P83110 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.52■■□□□ 1.04
HTRA3P83110 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.52■■□□□ 1.04
HTRA3P83110 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
HTRA3P83110 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HTRA3P83110 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.52■■□□□ 1.04
HTRA3P83110 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HTRA3P83110 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HTRA3P83110 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
HTRA3P83110 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
HTRA3P83110 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
HTRA3P83110 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
HTRA3P83110 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HTRA3P83110 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTRA3P83110 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HTRA3P83110 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.51■■□□□ 1.03
HTRA3P83110 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTRA3P83110 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.51■■□□□ 1.03
HTRA3P83110 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTRA3P83110 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTRA3P83110 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTRA3P83110 MIR661-201ENST00000384842 89 ntBASIC21.51■■□□□ 1.03
HTRA3P83110 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HTRA3P83110 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.51■■□□□ 1.03
HTRA3P83110 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.51■■□□□ 1.03
HTRA3P83110 LAGE3P1-201ENST00000425356 484 ntBASIC21.51■■□□□ 1.03
HTRA3P83110 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC21.51■■□□□ 1.03
HTRA3P83110 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.51■■□□□ 1.03
HTRA3P83110 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HTRA3P83110 AC109322.1-201ENST00000524499 1264 ntBASIC21.51■■□□□ 1.03
HTRA3P83110 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HTRA3P83110 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms