Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
MCCD1P59942 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
MCCD1P59942 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
MCCD1P59942 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
MCCD1P59942 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.93■□□□□ 0.78
MCCD1P59942 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.93■□□□□ 0.78
MCCD1P59942 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
MCCD1P59942 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.93■□□□□ 0.78
MCCD1P59942 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.93■□□□□ 0.78
MCCD1P59942 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.93■□□□□ 0.78
MCCD1P59942 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.93■□□□□ 0.78
MCCD1P59942 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.93■□□□□ 0.78
MCCD1P59942 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.93■□□□□ 0.78
MCCD1P59942 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.93■□□□□ 0.78
MCCD1P59942 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
MCCD1P59942 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.93■□□□□ 0.78
MCCD1P59942 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.93■□□□□ 0.78
MCCD1P59942 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
MCCD1P59942 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.93■□□□□ 0.78
MCCD1P59942 PKD1P6-201ENST00000343738 4769 ntBASIC19.93■□□□□ 0.78
MCCD1P59942 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
MCCD1P59942 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
MCCD1P59942 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MCCD1P59942 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.92■□□□□ 0.78
MCCD1P59942 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.92■□□□□ 0.78
MCCD1P59942 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MCCD1P59942 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MCCD1P59942 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.92■□□□□ 0.78
MCCD1P59942 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MCCD1P59942 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
MCCD1P59942 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MCCD1P59942 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MCCD1P59942 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.92■□□□□ 0.78
MCCD1P59942 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.92■□□□□ 0.78
MCCD1P59942 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MCCD1P59942 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.92■□□□□ 0.78
MCCD1P59942 AC005363.2-201ENST00000618631 242 ntBASIC19.92■□□□□ 0.78
MCCD1P59942 AL031432.5-201ENST00000641059 760 ntBASIC19.92■□□□□ 0.78
MCCD1P59942 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
MCCD1P59942 AL024508.2-201ENST00000607749 1894 ntBASIC19.92■□□□□ 0.78
MCCD1P59942 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
MCCD1P59942 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.92■□□□□ 0.78
MCCD1P59942 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
MCCD1P59942 ABALON-201ENST00000629058 1903 ntBASIC19.92■□□□□ 0.78
MCCD1P59942 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
MCCD1P59942 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
MCCD1P59942 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
MCCD1P59942 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MCCD1P59942 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MCCD1P59942 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.91■□□□□ 0.78
MCCD1P59942 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MCCD1P59942 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MCCD1P59942 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MCCD1P59942 BX664615.1-201ENST00000443558 458 ntBASIC19.91■□□□□ 0.78
MCCD1P59942 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
MCCD1P59942 GCSHP2-201ENST00000560971 527 ntBASIC19.91■□□□□ 0.78
MCCD1P59942 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MCCD1P59942 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.91■□□□□ 0.78
MCCD1P59942 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.91■□□□□ 0.78
MCCD1P59942 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
MCCD1P59942 AC024243.1-201ENST00000609234 778 ntBASIC19.91■□□□□ 0.78
MCCD1P59942 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MCCD1P59942 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MCCD1P59942 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.91■□□□□ 0.78
MCCD1P59942 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MCCD1P59942 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.91■□□□□ 0.78
MCCD1P59942 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.91■□□□□ 0.78
MCCD1P59942 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
MCCD1P59942 AC135776.1-201ENST00000319817 2481 ntBASIC19.91■□□□□ 0.78
MCCD1P59942 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
MCCD1P59942 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
MCCD1P59942 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
MCCD1P59942 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MCCD1P59942 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.9■□□□□ 0.78
MCCD1P59942 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MCCD1P59942 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MCCD1P59942 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
MCCD1P59942 PVRIG2P-201ENST00000435460 978 ntBASIC19.9■□□□□ 0.78
MCCD1P59942 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.9■□□□□ 0.78
MCCD1P59942 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.9■□□□□ 0.78
MCCD1P59942 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.9■□□□□ 0.78
MCCD1P59942 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
MCCD1P59942 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
MCCD1P59942 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.9■□□□□ 0.78
MCCD1P59942 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms