Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH13P55290 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH13P55290 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH13P55290 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH13P55290 CKBP1-201ENST00000565489 1086 ntBASIC18.23■□□□□ 0.51
CDH13P55290 AC130371.2-201ENST00000619443 611 ntBASIC18.23■□□□□ 0.51
CDH13P55290 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CDH13P55290 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH13P55290 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH13P55290 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH13P55290 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH13P55290 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH13P55290 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CDH13P55290 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CDH13P55290 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
CDH13P55290 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH13P55290 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH13P55290 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH13P55290 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH13P55290 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH13P55290 AC068880.1-201ENST00000507289 2297 ntBASIC18.23■□□□□ 0.51
CDH13P55290 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH13P55290 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH13P55290 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH13P55290 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CDH13P55290 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH13P55290 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH13P55290 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH13P55290 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.22■□□□□ 0.51
CDH13P55290 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
CDH13P55290 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.22■□□□□ 0.51
CDH13P55290 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDH13P55290 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH13P55290 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.22■□□□□ 0.51
CDH13P55290 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH13P55290 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH13P55290 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH13P55290 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
CDH13P55290 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH13P55290 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH13P55290 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH13P55290 RCC2P3-201ENST00000418112 1537 ntBASIC18.22■□□□□ 0.51
CDH13P55290 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH13P55290 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDH13P55290 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH13P55290 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDH13P55290 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH13P55290 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH13P55290 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH13P55290 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH13P55290 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH13P55290 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CDH13P55290 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH13P55290 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH13P55290 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH13P55290 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH13P55290 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH13P55290 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH13P55290 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH13P55290 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH13P55290 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.21■□□□□ 0.51
CDH13P55290 FAM207BP-201ENST00000447172 505 ntBASIC18.21■□□□□ 0.51
CDH13P55290 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CDH13P55290 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.21■□□□□ 0.51
CDH13P55290 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CDH13P55290 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.21■□□□□ 0.51
CDH13P55290 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH13P55290 AC073195.1-201ENST00000607241 877 ntBASIC18.21■□□□□ 0.51
CDH13P55290 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH13P55290 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH13P55290 NOC2LP2-201ENST00000407594 1944 ntBASIC18.21■□□□□ 0.51
CDH13P55290 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH13P55290 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH13P55290 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH13P55290 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH13P55290 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH13P55290 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 PCDHB18P-201ENST00000524813 2368 ntBASIC18.2■□□□□ 0.5
CDH13P55290 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH13P55290 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH13P55290 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH13P55290 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH13P55290 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 AC135776.1-201ENST00000319817 2481 ntBASIC18.2■□□□□ 0.5
CDH13P55290 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CDH13P55290 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH13P55290 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH13P55290 RARRES2P10-201ENST00000564312 460 ntBASIC18.2■□□□□ 0.5
CDH13P55290 AC026271.3-201ENST00000571884 352 ntBASIC18.2■□□□□ 0.5
CDH13P55290 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH13P55290 AL359736.2-201ENST00000621992 437 ntBASIC18.2■□□□□ 0.5
CDH13P55290 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms