Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ANO7L1-203ENST00000602586 1720 ntBASIC19.03■□□□□ 0.64
CDH4P55283 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDH4P55283 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH4P55283 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH4P55283 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH4P55283 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH4P55283 CROCCP3-202ENST00000420820 1947 ntBASIC19.02■□□□□ 0.64
CDH4P55283 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH4P55283 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH4P55283 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDH4P55283 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CDH4P55283 AL031598.1-201ENST00000561511 1773 ntBASIC19.02■□□□□ 0.64
CDH4P55283 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.02■□□□□ 0.64
CDH4P55283 ARMC10P1-201ENST00000313754 855 ntBASIC19.02■□□□□ 0.64
CDH4P55283 AC112907.2-201ENST00000448639 330 ntBASIC19.02■□□□□ 0.64
CDH4P55283 AC009065.1-201ENST00000564055 1225 ntBASIC19.02■□□□□ 0.64
CDH4P55283 AC087388.1-201ENST00000571370 1112 ntBASIC19.02■□□□□ 0.64
CDH4P55283 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CDH4P55283 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH4P55283 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
CDH4P55283 AL157888.1-201ENST00000631930 593 ntBASIC19.02■□□□□ 0.64
CDH4P55283 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH4P55283 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH4P55283 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH4P55283 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CDH4P55283 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.02■□□□□ 0.64
CDH4P55283 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CDH4P55283 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDH4P55283 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CDH4P55283 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDH4P55283 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.02■□□□□ 0.63
CDH4P55283 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.02■□□□□ 0.63
CDH4P55283 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
CDH4P55283 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH4P55283 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH4P55283 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH4P55283 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH4P55283 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH4P55283 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH4P55283 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH4P55283 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.01■□□□□ 0.63
CDH4P55283 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH4P55283 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH4P55283 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH4P55283 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH4P55283 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
CDH4P55283 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDH4P55283 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
CDH4P55283 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH4P55283 AL671277.2-201ENST00000458060 996 ntBASIC19.01■□□□□ 0.63
CDH4P55283 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.01■□□□□ 0.63
CDH4P55283 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.01■□□□□ 0.63
CDH4P55283 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.01■□□□□ 0.63
CDH4P55283 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CDH4P55283 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.01■□□□□ 0.63
CDH4P55283 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDH4P55283 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH4P55283 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDH4P55283 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH4P55283 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH4P55283 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CDH4P55283 AL031133.1-201ENST00000406807 723 ntBASIC19■□□□□ 0.63
CDH4P55283 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19■□□□□ 0.63
CDH4P55283 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH4P55283 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH4P55283 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH4P55283 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CDH4P55283 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19■□□□□ 0.63
CDH4P55283 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH4P55283 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDH4P55283 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19■□□□□ 0.63
CDH4P55283 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDH4P55283 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH4P55283 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH4P55283 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH4P55283 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CDH4P55283 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH4P55283 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CDH4P55283 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH4P55283 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH4P55283 MYLKP1-201ENST00000509077 1580 ntBASIC18.99■□□□□ 0.63
CDH4P55283 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH4P55283 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH4P55283 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH4P55283 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH4P55283 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH4P55283 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.99■□□□□ 0.63
CDH4P55283 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.99■□□□□ 0.63
CDH4P55283 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH4P55283 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.99■□□□□ 0.63
CDH4P55283 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.99■□□□□ 0.63
CDH4P55283 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
CDH4P55283 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.99■□□□□ 0.63
CDH4P55283 HYMAI.1-201ENST00000620949 238 ntBASIC18.99■□□□□ 0.63
CDH4P55283 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.99■□□□□ 0.63
CDH4P55283 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDH4P55283 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH4P55283 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH4P55283 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDH4P55283 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms