Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPHA4P54764 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
EPHA4P54764 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPHA4P54764 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
EPHA4P54764 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPHA4P54764 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
EPHA4P54764 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA4P54764 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA4P54764 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA4P54764 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
EPHA4P54764 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA4P54764 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA4P54764 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.9■□□□□ 0.46
EPHA4P54764 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHA4P54764 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA4P54764 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.9■□□□□ 0.46
EPHA4P54764 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.9■□□□□ 0.46
EPHA4P54764 AC083906.6-201ENST00000641366 219 ntBASIC17.9■□□□□ 0.46
EPHA4P54764 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHA4P54764 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA4P54764 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
EPHA4P54764 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA4P54764 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA4P54764 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
EPHA4P54764 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.9■□□□□ 0.46
EPHA4P54764 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
EPHA4P54764 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
EPHA4P54764 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
EPHA4P54764 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EPHA4P54764 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.9■□□□□ 0.46
EPHA4P54764 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.89■□□□□ 0.46
EPHA4P54764 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
EPHA4P54764 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
EPHA4P54764 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
EPHA4P54764 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.89■□□□□ 0.45
EPHA4P54764 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
EPHA4P54764 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
EPHA4P54764 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 KRT18P48-201ENST00000434763 852 ntBASIC17.89■□□□□ 0.45
EPHA4P54764 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.89■□□□□ 0.45
EPHA4P54764 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.89■□□□□ 0.45
EPHA4P54764 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 KRT8P26-201ENST00000534154 1276 ntBASIC17.89■□□□□ 0.45
EPHA4P54764 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.89■□□□□ 0.45
EPHA4P54764 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.89■□□□□ 0.45
EPHA4P54764 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.89■□□□□ 0.45
EPHA4P54764 NPAP1P7-201ENST00000613027 823 ntBASIC17.89■□□□□ 0.45
EPHA4P54764 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.89■□□□□ 0.45
EPHA4P54764 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
EPHA4P54764 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.89■□□□□ 0.45
EPHA4P54764 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.89■□□□□ 0.45
EPHA4P54764 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EPHA4P54764 AL357033.4-201ENST00000617703 1807 ntBASIC17.88■□□□□ 0.45
EPHA4P54764 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA4P54764 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.88■□□□□ 0.45
EPHA4P54764 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.88■□□□□ 0.45
EPHA4P54764 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.88■□□□□ 0.45
EPHA4P54764 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.88■□□□□ 0.45
EPHA4P54764 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.88■□□□□ 0.45
EPHA4P54764 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA4P54764 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA4P54764 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA4P54764 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA4P54764 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
EPHA4P54764 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA4P54764 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA4P54764 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
EPHA4P54764 TSSC2-201ENST00000450217 709 ntBASIC17.88■□□□□ 0.45
EPHA4P54764 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA4P54764 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.88■□□□□ 0.45
EPHA4P54764 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.88■□□□□ 0.45
EPHA4P54764 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.88■□□□□ 0.45
EPHA4P54764 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA4P54764 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.88■□□□□ 0.45
EPHA4P54764 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA4P54764 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
EPHA4P54764 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA4P54764 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.88■□□□□ 0.45
EPHA4P54764 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.88■□□□□ 0.45
EPHA4P54764 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EPHA4P54764 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.88■□□□□ 0.45
EPHA4P54764 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
EPHA4P54764 MTMR9LP-203ENST00000426597 1545 ntBASIC17.88■□□□□ 0.45
EPHA4P54764 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
EPHA4P54764 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms