Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.36■□□□□ 0.85
CDR1P51861 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDR1P51861 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.36■□□□□ 0.85
CDR1P51861 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
CDR1P51861 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDR1P51861 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.35■□□□□ 0.85
CDR1P51861 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CDR1P51861 AC104076.2-201ENST00000448912 469 ntBASIC20.35■□□□□ 0.85
CDR1P51861 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.35■□□□□ 0.85
CDR1P51861 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CDR1P51861 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
CDR1P51861 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.35■□□□□ 0.85
CDR1P51861 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CDR1P51861 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.35■□□□□ 0.85
CDR1P51861 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDR1P51861 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.35■□□□□ 0.85
CDR1P51861 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CDR1P51861 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CDR1P51861 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDR1P51861 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDR1P51861 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CDR1P51861 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CDR1P51861 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CDR1P51861 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.34■□□□□ 0.85
CDR1P51861 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.34■□□□□ 0.85
CDR1P51861 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
CDR1P51861 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.34■□□□□ 0.85
CDR1P51861 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.34■□□□□ 0.85
CDR1P51861 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CDR1P51861 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CDR1P51861 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.34■□□□□ 0.85
CDR1P51861 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDR1P51861 AC096733.2-201ENST00000609937 1394 ntBASIC20.34■□□□□ 0.85
CDR1P51861 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDR1P51861 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.33■□□□□ 0.85
CDR1P51861 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDR1P51861 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDR1P51861 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDR1P51861 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.33■□□□□ 0.85
CDR1P51861 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CDR1P51861 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDR1P51861 TSPY14P-201ENST00000303979 915 ntBASIC20.33■□□□□ 0.85
CDR1P51861 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDR1P51861 EGLN1P1-201ENST00000531623 762 ntBASIC20.33■□□□□ 0.85
CDR1P51861 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.33■□□□□ 0.85
CDR1P51861 AL445228.2-201ENST00000605589 952 ntBASIC20.33■□□□□ 0.85
CDR1P51861 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.33■□□□□ 0.85
CDR1P51861 AC092865.7-201ENST00000641832 219 ntBASIC20.33■□□□□ 0.85
CDR1P51861 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDR1P51861 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDR1P51861 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDR1P51861 AC073508.3-201ENST00000619697 1419 ntBASIC20.33■□□□□ 0.84
CDR1P51861 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
CDR1P51861 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDR1P51861 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDR1P51861 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CDR1P51861 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CDR1P51861 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CDR1P51861 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.32■□□□□ 0.84
CDR1P51861 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDR1P51861 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDR1P51861 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDR1P51861 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.32■□□□□ 0.84
CDR1P51861 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDR1P51861 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDR1P51861 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDR1P51861 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CDR1P51861 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms