Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCNKAP51800 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCNKAP51800 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCNKAP51800 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
CLCNKAP51800 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKAP51800 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCNKAP51800 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCNKAP51800 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKAP51800 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKAP51800 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKAP51800 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKAP51800 AL359075.1-203ENST00000462729 1002 ntBASIC18.25■□□□□ 0.51
CLCNKAP51800 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKAP51800 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCNKAP51800 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.25■□□□□ 0.51
CLCNKAP51800 AC104390.1-201ENST00000555663 520 ntBASIC18.25■□□□□ 0.51
CLCNKAP51800 MIR3180-4-201ENST00000582223 153 ntBASIC18.25■□□□□ 0.51
CLCNKAP51800 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCNKAP51800 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.25■□□□□ 0.51
CLCNKAP51800 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLCNKAP51800 AC024243.1-201ENST00000609234 778 ntBASIC18.25■□□□□ 0.51
CLCNKAP51800 AL121956.5-201ENST00000625261 221 ntBASIC18.25■□□□□ 0.51
CLCNKAP51800 AC006333.2-201ENST00000607957 2099 ntBASIC18.25■□□□□ 0.51
CLCNKAP51800 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKAP51800 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
CLCNKAP51800 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKAP51800 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLCNKAP51800 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKAP51800 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKAP51800 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKAP51800 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCNKAP51800 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKAP51800 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCNKAP51800 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKAP51800 AL357033.4-201ENST00000617703 1807 ntBASIC18.24■□□□□ 0.51
CLCNKAP51800 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKAP51800 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKAP51800 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKAP51800 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKAP51800 KRT18P23-201ENST00000435622 1283 ntBASIC18.24■□□□□ 0.51
CLCNKAP51800 AL671277.2-201ENST00000458060 996 ntBASIC18.24■□□□□ 0.51
CLCNKAP51800 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.24■□□□□ 0.51
CLCNKAP51800 KRT18P41-201ENST00000518924 1277 ntBASIC18.24■□□□□ 0.51
CLCNKAP51800 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
CLCNKAP51800 HYMAI.1-201ENST00000620949 238 ntBASIC18.24■□□□□ 0.51
CLCNKAP51800 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CLCNKAP51800 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKAP51800 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CLCNKAP51800 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKAP51800 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKAP51800 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKAP51800 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.24■□□□□ 0.51
CLCNKAP51800 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CLCNKAP51800 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCNKAP51800 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKAP51800 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKAP51800 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCNKAP51800 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCNKAP51800 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCNKAP51800 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CLCNKAP51800 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLCNKAP51800 MTMR9LP-203ENST00000426597 1545 ntBASIC18.23■□□□□ 0.51
CLCNKAP51800 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCNKAP51800 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCNKAP51800 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCNKAP51800 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCNKAP51800 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCNKAP51800 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCNKAP51800 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCNKAP51800 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCNKAP51800 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCNKAP51800 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCNKAP51800 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCNKAP51800 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCNKAP51800 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCNKAP51800 RASA4DP-201ENST00000460726 1199 ntBASIC18.23■□□□□ 0.51
CLCNKAP51800 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCNKAP51800 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.23■□□□□ 0.51
CLCNKAP51800 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.23■□□□□ 0.51
CLCNKAP51800 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.23■□□□□ 0.51
CLCNKAP51800 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCNKAP51800 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCNKAP51800 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCNKAP51800 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCNKAP51800 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.23■□□□□ 0.51
CLCNKAP51800 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLCNKAP51800 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLCNKAP51800 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.23■□□□□ 0.51
CLCNKAP51800 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
CLCNKAP51800 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCNKAP51800 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.22■□□□□ 0.51
CLCNKAP51800 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLCNKAP51800 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms