Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN2P51788 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCN2P51788 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN2P51788 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.02■□□□□ 0.48
CLCN2P51788 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.02■□□□□ 0.48
CLCN2P51788 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.02■□□□□ 0.48
CLCN2P51788 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLCN2P51788 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN2P51788 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN2P51788 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN2P51788 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.02■□□□□ 0.48
CLCN2P51788 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN2P51788 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.02■□□□□ 0.48
CLCN2P51788 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
CLCN2P51788 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CLCN2P51788 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN2P51788 AC116562.2-201ENST00000507042 360 ntBASIC18.02■□□□□ 0.48
CLCN2P51788 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLCN2P51788 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CLCN2P51788 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.02■□□□□ 0.48
CLCN2P51788 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.02■□□□□ 0.48
CLCN2P51788 REXO1L10P-201ENST00000615707 1290 ntBASIC18.02■□□□□ 0.48
CLCN2P51788 REXO1L12P-201ENST00000622156 912 ntBASIC18.02■□□□□ 0.48
CLCN2P51788 AC073912.3-201ENST00000624414 853 ntBASIC18.02■□□□□ 0.48
CLCN2P51788 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CLCN2P51788 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CLCN2P51788 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CLCN2P51788 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.02■□□□□ 0.47
CLCN2P51788 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.02■□□□□ 0.47
CLCN2P51788 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN2P51788 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN2P51788 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN2P51788 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN2P51788 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN2P51788 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN2P51788 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN2P51788 FSCN1P1-201ENST00000568912 1481 ntBASIC18.01■□□□□ 0.47
CLCN2P51788 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN2P51788 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN2P51788 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN2P51788 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN2P51788 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN2P51788 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN2P51788 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCN2P51788 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CLCN2P51788 UNC93B2-201ENST00000285383 730 ntBASIC18.01■□□□□ 0.47
CLCN2P51788 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCN2P51788 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CLCN2P51788 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.01■□□□□ 0.47
CLCN2P51788 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CLCN2P51788 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.01■□□□□ 0.47
CLCN2P51788 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN2P51788 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.01■□□□□ 0.47
CLCN2P51788 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCN2P51788 BX088651.1-201ENST00000540551 451 ntBASIC18.01■□□□□ 0.47
CLCN2P51788 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN2P51788 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.01■□□□□ 0.47
CLCN2P51788 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCN2P51788 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN2P51788 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN2P51788 AC104417.2-201ENST00000562989 1793 ntBASIC18.01■□□□□ 0.47
CLCN2P51788 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN2P51788 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN2P51788 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CLCN2P51788 FP475955.4-201ENST00000623131 1990 ntBASIC18■□□□□ 0.47
CLCN2P51788 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
CLCN2P51788 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLCN2P51788 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLCN2P51788 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18■□□□□ 0.47
CLCN2P51788 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18■□□□□ 0.47
CLCN2P51788 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLCN2P51788 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18■□□□□ 0.47
CLCN2P51788 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLCN2P51788 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18■□□□□ 0.47
CLCN2P51788 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18■□□□□ 0.47
CLCN2P51788 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18■□□□□ 0.47
CLCN2P51788 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18■□□□□ 0.47
CLCN2P51788 MIR6786-201ENST00000616843 113 ntBASIC18■□□□□ 0.47
CLCN2P51788 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18■□□□□ 0.47
CLCN2P51788 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLCN2P51788 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CLCN2P51788 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18■□□□□ 0.47
CLCN2P51788 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN2P51788 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms