Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.79■□□□□ 0.92
BRCA2P51587 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BRCA2P51587 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.79■□□□□ 0.92
BRCA2P51587 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
BRCA2P51587 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRCA2P51587 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.79■□□□□ 0.92
BRCA2P51587 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.79■□□□□ 0.92
BRCA2P51587 AC009533.2-201ENST00000543664 586 ntBASIC20.79■□□□□ 0.92
BRCA2P51587 AC114341.1-201ENST00000618070 349 ntBASIC20.79■□□□□ 0.92
BRCA2P51587 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
BRCA2P51587 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCA2P51587 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.78■□□□□ 0.92
BRCA2P51587 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.78■□□□□ 0.92
BRCA2P51587 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.78■□□□□ 0.92
BRCA2P51587 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.78■□□□□ 0.92
BRCA2P51587 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BRCA2P51587 AL596442.2-201ENST00000610240 980 ntBASIC20.78■□□□□ 0.92
BRCA2P51587 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BRCA2P51587 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCA2P51587 AL512353.2-201ENST00000448759 1962 ntBASIC20.78■□□□□ 0.92
BRCA2P51587 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.78■□□□□ 0.92
BRCA2P51587 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCA2P51587 DNAJB3-201ENST00000446806 729 ntBASIC20.78■□□□□ 0.92
BRCA2P51587 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCA2P51587 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
BRCA2P51587 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCA2P51587 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCA2P51587 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCA2P51587 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCA2P51587 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.78■□□□□ 0.92
BRCA2P51587 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BRCA2P51587 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCA2P51587 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BRCA2P51587 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BRCA2P51587 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.78■□□□□ 0.92
BRCA2P51587 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.78■□□□□ 0.92
BRCA2P51587 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.78■□□□□ 0.92
BRCA2P51587 AC099778.1-201ENST00000568593 1911 ntBASIC20.78■□□□□ 0.92
BRCA2P51587 AC009237.14-201ENST00000609975 1594 ntBASIC20.78■□□□□ 0.92
BRCA2P51587 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
BRCA2P51587 LINC01521-201ENST00000504184 1943 ntBASIC20.77■□□□□ 0.92
BRCA2P51587 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BRCA2P51587 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
BRCA2P51587 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.77■□□□□ 0.92
BRCA2P51587 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BRCA2P51587 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BRCA2P51587 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.77■□□□□ 0.92
BRCA2P51587 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BRCA2P51587 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
BRCA2P51587 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
BRCA2P51587 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
BRCA2P51587 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
BRCA2P51587 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
BRCA2P51587 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BRCA2P51587 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
BRCA2P51587 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.91
BRCA2P51587 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
BRCA2P51587 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
BRCA2P51587 ZNF815P-204ENST00000434898 1737 ntBASIC20.77■□□□□ 0.91
BRCA2P51587 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
BRCA2P51587 AC004817.3-201ENST00000602957 2129 ntBASIC20.77■□□□□ 0.91
BRCA2P51587 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.76■□□□□ 0.91
BRCA2P51587 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRCA2P51587 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRCA2P51587 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRCA2P51587 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.76■□□□□ 0.91
BRCA2P51587 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.76■□□□□ 0.91
BRCA2P51587 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRCA2P51587 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRCA2P51587 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.76■□□□□ 0.91
BRCA2P51587 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRCA2P51587 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
BRCA2P51587 RPS2P28-201ENST00000314255 741 ntBASIC20.76■□□□□ 0.91
BRCA2P51587 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.76■□□□□ 0.91
BRCA2P51587 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.76■□□□□ 0.91
BRCA2P51587 AL591684.3-201ENST00000605187 298 ntBASIC20.76■□□□□ 0.91
BRCA2P51587 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
BRCA2P51587 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
BRCA2P51587 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.75■□□□□ 0.91
BRCA2P51587 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRCA2P51587 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.75■□□□□ 0.91
BRCA2P51587 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRCA2P51587 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRCA2P51587 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRCA2P51587 POM121L3P-201ENST00000419331 1163 ntBASIC20.75■□□□□ 0.91
BRCA2P51587 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRCA2P51587 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRCA2P51587 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRCA2P51587 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRCA2P51587 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
BRCA2P51587 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
BRCA2P51587 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.75■□□□□ 0.91
BRCA2P51587 YBX1P5-201ENST00000509441 847 ntBASIC20.75■□□□□ 0.91
BRCA2P51587 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.75■□□□□ 0.91
BRCA2P51587 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRCA2P51587 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
BRCA2P51587 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
BRCA2P51587 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRCA2P51587 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BRCA2P51587 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms