Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
SSR4P51571 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SSR4P51571 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.07■□□□□ 0.32
SSR4P51571 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.07■□□□□ 0.32
SSR4P51571 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.07■□□□□ 0.32
SSR4P51571 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 AC005332.1-201ENST00000577698 1310 ntBASIC17.07■□□□□ 0.32
SSR4P51571 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.07■□□□□ 0.32
SSR4P51571 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.07■□□□□ 0.32
SSR4P51571 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SSR4P51571 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.07■□□□□ 0.32
SSR4P51571 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.07■□□□□ 0.32
SSR4P51571 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SSR4P51571 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.07■□□□□ 0.32
SSR4P51571 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.07■□□□□ 0.32
SSR4P51571 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.07■□□□□ 0.32
SSR4P51571 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.07■□□□□ 0.32
SSR4P51571 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SSR4P51571 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SSR4P51571 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SSR4P51571 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SSR4P51571 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.06■□□□□ 0.32
SSR4P51571 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SSR4P51571 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.06■□□□□ 0.32
SSR4P51571 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 AP000593.1-201ENST00000393668 712 ntBASIC17.06■□□□□ 0.32
SSR4P51571 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.06■□□□□ 0.32
SSR4P51571 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 UPK3BP1-201ENST00000428678 509 ntBASIC17.06■□□□□ 0.32
SSR4P51571 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.06■□□□□ 0.32
SSR4P51571 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SSR4P51571 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.06■□□□□ 0.32
SSR4P51571 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.06■□□□□ 0.32
SSR4P51571 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.06■□□□□ 0.32
SSR4P51571 AL136038.4-201ENST00000603606 1261 ntBASIC17.06■□□□□ 0.32
SSR4P51571 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.06■□□□□ 0.32
SSR4P51571 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.06■□□□□ 0.32
SSR4P51571 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SSR4P51571 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.06■□□□□ 0.32
SSR4P51571 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.06■□□□□ 0.32
SSR4P51571 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSR4P51571 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.06■□□□□ 0.32
SSR4P51571 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR4P51571 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR4P51571 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR4P51571 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR4P51571 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR4P51571 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.05■□□□□ 0.32
SSR4P51571 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SSR4P51571 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR4P51571 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSR4P51571 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR4P51571 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR4P51571 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SSR4P51571 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.05■□□□□ 0.32
SSR4P51571 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR4P51571 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSR4P51571 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR4P51571 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR4P51571 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SSR4P51571 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.05■□□□□ 0.32
SSR4P51571 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.05■□□□□ 0.32
SSR4P51571 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.05■□□□□ 0.32
SSR4P51571 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.05■□□□□ 0.32
SSR4P51571 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSR4P51571 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.05■□□□□ 0.32
SSR4P51571 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SSR4P51571 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSR4P51571 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms