Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3AP50213 GUSBP6-202ENST00000438529 1198 ntBASIC18.11■□□□□ 0.49
IDH3AP50213 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3AP50213 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
IDH3AP50213 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3AP50213 MIR4758-201ENST00000577688 71 ntBASIC18.11■□□□□ 0.49
IDH3AP50213 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.11■□□□□ 0.49
IDH3AP50213 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.11■□□□□ 0.49
IDH3AP50213 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3AP50213 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.11■□□□□ 0.49
IDH3AP50213 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3AP50213 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.11■□□□□ 0.49
IDH3AP50213 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3AP50213 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3AP50213 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
IDH3AP50213 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
IDH3AP50213 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
IDH3AP50213 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3AP50213 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IDH3AP50213 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3AP50213 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3AP50213 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3AP50213 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.1■□□□□ 0.49
IDH3AP50213 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3AP50213 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
IDH3AP50213 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
IDH3AP50213 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3AP50213 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
IDH3AP50213 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3AP50213 SIRPAP1-201ENST00000448467 1770 ntBASIC18.1■□□□□ 0.49
IDH3AP50213 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.1■□□□□ 0.49
IDH3AP50213 KRT8P11-201ENST00000409686 1436 ntBASIC18.1■□□□□ 0.49
IDH3AP50213 KRT8P3-201ENST00000519669 1449 ntBASIC18.1■□□□□ 0.49
IDH3AP50213 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3AP50213 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3AP50213 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3AP50213 Z85996.1-201ENST00000494644 937 ntBASIC18.1■□□□□ 0.49
IDH3AP50213 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.1■□□□□ 0.49
IDH3AP50213 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.1■□□□□ 0.49
IDH3AP50213 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.1■□□□□ 0.49
IDH3AP50213 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
IDH3AP50213 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3AP50213 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
IDH3AP50213 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.1■□□□□ 0.49
IDH3AP50213 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
IDH3AP50213 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3AP50213 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3AP50213 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3AP50213 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IDH3AP50213 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.09■□□□□ 0.49
IDH3AP50213 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.09■□□□□ 0.49
IDH3AP50213 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.09■□□□□ 0.49
IDH3AP50213 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.09■□□□□ 0.49
IDH3AP50213 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
IDH3AP50213 NBPF21P-201ENST00000425093 1451 ntBASIC18.09■□□□□ 0.49
IDH3AP50213 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.09■□□□□ 0.49
IDH3AP50213 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
IDH3AP50213 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.09■□□□□ 0.49
IDH3AP50213 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
IDH3AP50213 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.09■□□□□ 0.49
IDH3AP50213 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.09■□□□□ 0.49
IDH3AP50213 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
IDH3AP50213 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.09■□□□□ 0.49
IDH3AP50213 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.09■□□□□ 0.49
IDH3AP50213 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.09■□□□□ 0.49
IDH3AP50213 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.09■□□□□ 0.49
IDH3AP50213 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
IDH3AP50213 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.09■□□□□ 0.49
IDH3AP50213 AC009053.2-201ENST00000563701 2365 ntBASIC18.09■□□□□ 0.49
IDH3AP50213 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.09■□□□□ 0.49
IDH3AP50213 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.09■□□□□ 0.49
IDH3AP50213 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.09■□□□□ 0.49
IDH3AP50213 AC012317.2-201ENST00000623305 2251 ntBASIC18.09■□□□□ 0.49
IDH3AP50213 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IDH3AP50213 FLJ13224-201ENST00000313737 1514 ntBASIC18.08■□□□□ 0.49
IDH3AP50213 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IDH3AP50213 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IDH3AP50213 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
IDH3AP50213 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IDH3AP50213 AL645608.8-201ENST00000606034 2086 ntBASIC18.08■□□□□ 0.49
IDH3AP50213 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
IDH3AP50213 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
IDH3AP50213 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IDH3AP50213 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms