Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
UBE2AP49459 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
UBE2AP49459 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2AP49459 TSPY21P-201ENST00000433481 731 ntBASIC11.82□□□□□ -0.52
UBE2AP49459 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC11.82□□□□□ -0.52
UBE2AP49459 LY6E-205ENST00000519611 635 ntTSL 3 BASIC11.82□□□□□ -0.52
UBE2AP49459 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
UBE2AP49459 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC11.82□□□□□ -0.52
UBE2AP49459 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
UBE2AP49459 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2AP49459 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC11.82□□□□□ -0.52
UBE2AP49459 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC11.82□□□□□ -0.52
UBE2AP49459 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
UBE2AP49459 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2AP49459 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
UBE2AP49459 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
UBE2AP49459 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2AP49459 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
UBE2AP49459 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
UBE2AP49459 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2AP49459 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2AP49459 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2AP49459 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
UBE2AP49459 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC11.82□□□□□ -0.52
UBE2AP49459 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC11.82□□□□□ -0.52
UBE2AP49459 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC11.81□□□□□ -0.52
UBE2AP49459 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
UBE2AP49459 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC11.81□□□□□ -0.52
UBE2AP49459 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
UBE2AP49459 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
UBE2AP49459 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC11.81□□□□□ -0.52
UBE2AP49459 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
UBE2AP49459 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC11.81□□□□□ -0.52
UBE2AP49459 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC11.81□□□□□ -0.52
UBE2AP49459 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC11.81□□□□□ -0.52
UBE2AP49459 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 AP002982.1-201ENST00000492365 877 ntBASIC11.81□□□□□ -0.52
UBE2AP49459 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC11.81□□□□□ -0.52
UBE2AP49459 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC11.81□□□□□ -0.52
UBE2AP49459 AC110285.5-201ENST00000611501 352 ntBASIC11.81□□□□□ -0.52
UBE2AP49459 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
UBE2AP49459 FAM197Y4-202ENST00000622692 608 ntBASIC11.81□□□□□ -0.52
UBE2AP49459 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC11.81□□□□□ -0.52
UBE2AP49459 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
UBE2AP49459 AC063926.3-201ENST00000624734 5658 ntBASIC11.81□□□□□ -0.52
UBE2AP49459 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
UBE2AP49459 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
UBE2AP49459 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
UBE2AP49459 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
UBE2AP49459 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC11.81□□□□□ -0.52
UBE2AP49459 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
UBE2AP49459 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC11.81□□□□□ -0.52
UBE2AP49459 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
UBE2AP49459 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
UBE2AP49459 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
UBE2AP49459 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
UBE2AP49459 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
UBE2AP49459 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
UBE2AP49459 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC11.8□□□□□ -0.52
UBE2AP49459 FAM201B-201ENST00000458407 597 ntBASIC11.8□□□□□ -0.52
UBE2AP49459 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC11.8□□□□□ -0.52
UBE2AP49459 C1QBPP2-201ENST00000528754 825 ntBASIC11.8□□□□□ -0.52
UBE2AP49459 AC233263.1-201ENST00000578059 224 ntBASIC11.8□□□□□ -0.52
UBE2AP49459 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC11.8□□□□□ -0.52
UBE2AP49459 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
UBE2AP49459 HLA-A-209ENST00000638375 975 ntBASIC11.8□□□□□ -0.52
UBE2AP49459 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC11.8□□□□□ -0.52
UBE2AP49459 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
UBE2AP49459 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms