Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.46■□□□□ 0.71
MTHFRP42898 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.46■□□□□ 0.71
MTHFRP42898 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MTHFRP42898 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.46■□□□□ 0.71
MTHFRP42898 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MTHFRP42898 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MTHFRP42898 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.46■□□□□ 0.71
MTHFRP42898 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
MTHFRP42898 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MTHFRP42898 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.46■□□□□ 0.71
MTHFRP42898 RCC2P3-201ENST00000418112 1537 ntBASIC19.46■□□□□ 0.71
MTHFRP42898 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MTHFRP42898 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MTHFRP42898 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.45■□□□□ 0.7
MTHFRP42898 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MTHFRP42898 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
MTHFRP42898 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MTHFRP42898 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MTHFRP42898 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MTHFRP42898 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.45■□□□□ 0.7
MTHFRP42898 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
MTHFRP42898 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
MTHFRP42898 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
MTHFRP42898 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.45■□□□□ 0.7
MTHFRP42898 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.45■□□□□ 0.7
MTHFRP42898 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MTHFRP42898 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.45■□□□□ 0.7
MTHFRP42898 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.45■□□□□ 0.7
MTHFRP42898 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MTHFRP42898 MIR3180-4-201ENST00000582223 153 ntBASIC19.45■□□□□ 0.7
MTHFRP42898 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.45■□□□□ 0.7
MTHFRP42898 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MTHFRP42898 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MTHFRP42898 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.45■□□□□ 0.7
MTHFRP42898 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MTHFRP42898 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.45■□□□□ 0.7
MTHFRP42898 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MTHFRP42898 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
MTHFRP42898 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MTHFRP42898 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MTHFRP42898 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTHFRP42898 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.44■□□□□ 0.7
MTHFRP42898 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTHFRP42898 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTHFRP42898 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTHFRP42898 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTHFRP42898 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.44■□□□□ 0.7
MTHFRP42898 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MTHFRP42898 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTHFRP42898 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTHFRP42898 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTHFRP42898 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MTHFRP42898 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.44■□□□□ 0.7
MTHFRP42898 PMS2P1-201ENST00000431037 1228 ntBASIC19.44■□□□□ 0.7
MTHFRP42898 AL592071.1-201ENST00000611956 408 ntBASIC19.44■□□□□ 0.7
MTHFRP42898 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.44■□□□□ 0.7
MTHFRP42898 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.44■□□□□ 0.7
MTHFRP42898 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MTHFRP42898 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MTHFRP42898 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.44■□□□□ 0.7
MTHFRP42898 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
MTHFRP42898 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.44■□□□□ 0.7
MTHFRP42898 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.43■□□□□ 0.7
MTHFRP42898 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTHFRP42898 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTHFRP42898 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.43■□□□□ 0.7
MTHFRP42898 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MTHFRP42898 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTHFRP42898 AKR1C7P-201ENST00000305623 895 ntBASIC19.43■□□□□ 0.7
MTHFRP42898 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.43■□□□□ 0.7
MTHFRP42898 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
MTHFRP42898 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTHFRP42898 IGHGP-201ENST00000390555 1178 ntBASIC19.43■□□□□ 0.7
MTHFRP42898 TSPY12P-201ENST00000421279 868 ntBASIC19.43■□□□□ 0.7
MTHFRP42898 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MTHFRP42898 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.43■□□□□ 0.7
MTHFRP42898 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
MTHFRP42898 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.43■□□□□ 0.7
MTHFRP42898 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
MTHFRP42898 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.43■□□□□ 0.7
MTHFRP42898 AL671883.3-201ENST00000603274 991 ntBASIC19.43■□□□□ 0.7
MTHFRP42898 REXO1L6P-202ENST00000619970 1078 ntBASIC19.43■□□□□ 0.7
MTHFRP42898 AC124864.1-201ENST00000623408 392 ntBASIC19.43■□□□□ 0.7
MTHFRP42898 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MTHFRP42898 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.43■□□□□ 0.7
MTHFRP42898 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTHFRP42898 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTHFRP42898 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.43■□□□□ 0.7
MTHFRP42898 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.43■□□□□ 0.7
MTHFRP42898 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTHFRP42898 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTHFRP42898 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MTHFRP42898 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.43■□□□□ 0.7
MTHFRP42898 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.43■□□□□ 0.7
MTHFRP42898 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MTHFRP42898 AL512353.2-201ENST00000448759 1962 ntBASIC19.43■□□□□ 0.7
MTHFRP42898 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTHFRP42898 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MTHFRP42898 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MTHFRP42898 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms