Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
NCAPD3P42695 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
NCAPD3P42695 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
NCAPD3P42695 AL356309.3-201ENST00000624132 1934 ntBASIC32.82■■■□□ 2.84
NCAPD3P42695 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
NCAPD3P42695 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
NCAPD3P42695 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC32.82■■■□□ 2.84
NCAPD3P42695 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC32.82■■■□□ 2.84
NCAPD3P42695 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC32.82■■■□□ 2.84
NCAPD3P42695 LINC01521-201ENST00000504184 1943 ntBASIC32.82■■■□□ 2.84
NCAPD3P42695 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
NCAPD3P42695 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
NCAPD3P42695 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
NCAPD3P42695 AC007967.2-201ENST00000432613 625 ntBASIC32.81■■■□□ 2.84
NCAPD3P42695 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC32.81■■■□□ 2.84
NCAPD3P42695 KRT18P41-201ENST00000518924 1277 ntBASIC32.81■■■□□ 2.84
NCAPD3P42695 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC32.81■■■□□ 2.84
NCAPD3P42695 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC32.81■■■□□ 2.84
NCAPD3P42695 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC32.81■■■□□ 2.84
NCAPD3P42695 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
NCAPD3P42695 AP002414.3-201ENST00000589352 1468 ntBASIC32.81■■■□□ 2.84
NCAPD3P42695 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC32.81■■■□□ 2.84
NCAPD3P42695 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
NCAPD3P42695 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
NCAPD3P42695 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC32.8■■■□□ 2.84
NCAPD3P42695 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC32.8■■■□□ 2.84
NCAPD3P42695 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
NCAPD3P42695 AC211486.1-202ENST00000416371 468 ntBASIC32.8■■■□□ 2.84
NCAPD3P42695 AC068472.1-201ENST00000474589 881 ntBASIC32.8■■■□□ 2.84
NCAPD3P42695 AC211476.1-201ENST00000503899 468 ntBASIC32.8■■■□□ 2.84
NCAPD3P42695 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC32.8■■■□□ 2.84
NCAPD3P42695 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC32.8■■■□□ 2.84
NCAPD3P42695 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
NCAPD3P42695 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
NCAPD3P42695 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
NCAPD3P42695 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
NCAPD3P42695 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
NCAPD3P42695 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
NCAPD3P42695 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC32.8■■■□□ 2.84
NCAPD3P42695 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC32.8■■■□□ 2.84
NCAPD3P42695 MTDHP5-201ENST00000598980 586 ntBASIC32.8■■■□□ 2.84
NCAPD3P42695 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
NCAPD3P42695 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC32.79■■■□□ 2.84
NCAPD3P42695 Z82202.1-201ENST00000623446 1880 ntBASIC32.79■■■□□ 2.84
NCAPD3P42695 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC32.79■■■□□ 2.84
NCAPD3P42695 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
NCAPD3P42695 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC32.79■■■□□ 2.84
NCAPD3P42695 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC32.79■■■□□ 2.84
NCAPD3P42695 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
NCAPD3P42695 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC32.79■■■□□ 2.84
NCAPD3P42695 TCF3P1-201ENST00000423021 1937 ntBASIC32.79■■■□□ 2.84
NCAPD3P42695 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
NCAPD3P42695 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
NCAPD3P42695 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC32.79■■■□□ 2.84
NCAPD3P42695 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC32.79■■■□□ 2.84
NCAPD3P42695 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC32.79■■■□□ 2.84
NCAPD3P42695 AC105339.3-201ENST00000560043 636 ntBASIC32.79■■■□□ 2.84
NCAPD3P42695 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
NCAPD3P42695 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
NCAPD3P42695 AC125634.1-201ENST00000438758 1403 ntBASIC32.79■■■□□ 2.84
NCAPD3P42695 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC32.78■■■□□ 2.84
NCAPD3P42695 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
NCAPD3P42695 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
NCAPD3P42695 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC32.78■■■□□ 2.84
NCAPD3P42695 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC32.78■■■□□ 2.84
NCAPD3P42695 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC32.78■■■□□ 2.84
NCAPD3P42695 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
NCAPD3P42695 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC32.78■■■□□ 2.84
NCAPD3P42695 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC32.78■■■□□ 2.84
NCAPD3P42695 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC32.78■■■□□ 2.84
NCAPD3P42695 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC32.78■■■□□ 2.84
NCAPD3P42695 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC32.78■■■□□ 2.84
NCAPD3P42695 RPS29-206ENST00000557111 488 ntTSL 2 BASIC32.78■■■□□ 2.84
NCAPD3P42695 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC32.78■■■□□ 2.84
NCAPD3P42695 Z98044.1-201ENST00000632503 1764 ntBASIC32.78■■■□□ 2.84
NCAPD3P42695 STK25-234ENST00000535007 2459 ntTSL 2 BASIC32.77■■■□□ 2.84
NCAPD3P42695 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC32.77■■■□□ 2.84
NCAPD3P42695 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC32.77■■■□□ 2.84
NCAPD3P42695 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
NCAPD3P42695 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC32.77■■■□□ 2.84
NCAPD3P42695 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC32.77■■■□□ 2.84
NCAPD3P42695 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
NCAPD3P42695 AL391422.3-201ENST00000603791 2761 ntBASIC32.77■■■□□ 2.84
NCAPD3P42695 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
NCAPD3P42695 MCCD1P2-201ENST00000423228 335 ntBASIC32.77■■■□□ 2.84
NCAPD3P42695 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC32.77■■■□□ 2.84
NCAPD3P42695 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC32.77■■■□□ 2.84
NCAPD3P42695 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC32.77■■■□□ 2.84
NCAPD3P42695 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC32.77■■■□□ 2.84
NCAPD3P42695 COPE-211ENST00000600932 1144 ntTSL 5 BASIC32.77■■■□□ 2.84
NCAPD3P42695 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC32.77■■■□□ 2.84
NCAPD3P42695 AC099778.1-201ENST00000568593 1911 ntBASIC32.77■■■□□ 2.84
NCAPD3P42695 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
NCAPD3P42695 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC32.76■■■□□ 2.84
NCAPD3P42695 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
NCAPD3P42695 CALY-203ENST00000368558 825 ntTSL 5 BASIC32.76■■■□□ 2.84
NCAPD3P42695 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC32.76■■■□□ 2.84
NCAPD3P42695 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
NCAPD3P42695 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC32.76■■■□□ 2.83
NCAPD3P42695 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC32.76■■■□□ 2.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms