Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.1■□□□□ 0.65
SLC6A4P31645 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.1■□□□□ 0.65
SLC6A4P31645 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SLC6A4P31645 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SLC6A4P31645 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SLC6A4P31645 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A4P31645 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A4P31645 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A4P31645 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.09■□□□□ 0.65
SLC6A4P31645 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A4P31645 AP000974.1-201ENST00000623909 2387 ntBASIC19.09■□□□□ 0.65
SLC6A4P31645 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SLC6A4P31645 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A4P31645 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC6A4P31645 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
SLC6A4P31645 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.09■□□□□ 0.65
SLC6A4P31645 AL136038.3-201ENST00000561909 1096 ntBASIC19.09■□□□□ 0.65
SLC6A4P31645 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC6A4P31645 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SLC6A4P31645 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SLC6A4P31645 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.09■□□□□ 0.65
SLC6A4P31645 AL391807.1-203ENST00000604392 2365 ntBASIC19.08■□□□□ 0.65
SLC6A4P31645 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC6A4P31645 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SLC6A4P31645 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC6A4P31645 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC6A4P31645 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC6A4P31645 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC6A4P31645 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.08■□□□□ 0.65
SLC6A4P31645 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SLC6A4P31645 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SLC6A4P31645 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A4P31645 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SLC6A4P31645 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.08■□□□□ 0.64
SLC6A4P31645 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC6A4P31645 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A4P31645 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.08■□□□□ 0.64
SLC6A4P31645 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.08■□□□□ 0.64
SLC6A4P31645 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
SLC6A4P31645 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A4P31645 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A4P31645 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A4P31645 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.08■□□□□ 0.64
SLC6A4P31645 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A4P31645 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.08■□□□□ 0.64
SLC6A4P31645 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.08■□□□□ 0.64
SLC6A4P31645 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SLC6A4P31645 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SLC6A4P31645 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
SLC6A4P31645 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC6A4P31645 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SLC6A4P31645 AC099343.3-201ENST00000605834 2503 ntBASIC19.07■□□□□ 0.64
SLC6A4P31645 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC6A4P31645 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
SLC6A4P31645 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC6A4P31645 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC6A4P31645 HLA-F-220ENST00000434407 884 ntBASIC19.07■□□□□ 0.64
SLC6A4P31645 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC6A4P31645 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC6A4P31645 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SLC6A4P31645 AL136038.4-201ENST00000603606 1261 ntBASIC19.07■□□□□ 0.64
SLC6A4P31645 AC116407.4-201ENST00000623319 1061 ntBASIC19.07■□□□□ 0.64
SLC6A4P31645 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.07■□□□□ 0.64
SLC6A4P31645 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.07■□□□□ 0.64
SLC6A4P31645 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SLC6A4P31645 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.07■□□□□ 0.64
SLC6A4P31645 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.06■□□□□ 0.64
SLC6A4P31645 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SLC6A4P31645 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A4P31645 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A4P31645 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SLC6A4P31645 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A4P31645 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SLC6A4P31645 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SLC6A4P31645 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SLC6A4P31645 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms