Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.72■□□□□ 0.11
COL8A2P25067 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
COL8A2P25067 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.72■□□□□ 0.11
COL8A2P25067 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.72■□□□□ 0.11
COL8A2P25067 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.72■□□□□ 0.11
COL8A2P25067 VENTXP5-201ENST00000523979 775 ntBASIC15.72■□□□□ 0.11
COL8A2P25067 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 AL136038.3-201ENST00000561909 1096 ntBASIC15.72■□□□□ 0.11
COL8A2P25067 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.72■□□□□ 0.11
COL8A2P25067 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.72■□□□□ 0.11
COL8A2P25067 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.72■□□□□ 0.11
COL8A2P25067 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.72■□□□□ 0.11
COL8A2P25067 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.72■□□□□ 0.11
COL8A2P25067 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
COL8A2P25067 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
COL8A2P25067 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.72■□□□□ 0.11
COL8A2P25067 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
COL8A2P25067 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL8A2P25067 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.71■□□□□ 0.11
COL8A2P25067 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
COL8A2P25067 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.71■□□□□ 0.11
COL8A2P25067 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL8A2P25067 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL8A2P25067 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL8A2P25067 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
COL8A2P25067 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL8A2P25067 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.71■□□□□ 0.11
COL8A2P25067 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL8A2P25067 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.71■□□□□ 0.11
COL8A2P25067 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.71■□□□□ 0.11
COL8A2P25067 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL8A2P25067 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.71■□□□□ 0.11
COL8A2P25067 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
COL8A2P25067 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.71■□□□□ 0.11
COL8A2P25067 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.71■□□□□ 0.11
COL8A2P25067 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
COL8A2P25067 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL8A2P25067 AC116407.4-201ENST00000623319 1061 ntBASIC15.71■□□□□ 0.11
COL8A2P25067 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.71■□□□□ 0.11
COL8A2P25067 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL8A2P25067 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
COL8A2P25067 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL8A2P25067 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
COL8A2P25067 AL161938.1-201ENST00000569833 2180 ntBASIC15.7■□□□□ 0.1
COL8A2P25067 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.7■□□□□ 0.1
COL8A2P25067 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.7■□□□□ 0.1
COL8A2P25067 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
COL8A2P25067 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
COL8A2P25067 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
COL8A2P25067 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 HBZP1-201ENST00000354915 429 ntBASIC15.7■□□□□ 0.1
COL8A2P25067 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
COL8A2P25067 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.7■□□□□ 0.1
COL8A2P25067 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.7■□□□□ 0.1
COL8A2P25067 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.7■□□□□ 0.1
COL8A2P25067 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.7■□□□□ 0.1
COL8A2P25067 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
COL8A2P25067 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.7■□□□□ 0.1
COL8A2P25067 AL157888.1-201ENST00000631930 593 ntBASIC15.7■□□□□ 0.1
COL8A2P25067 AC068587.9-201ENST00000641814 219 ntBASIC15.7■□□□□ 0.1
COL8A2P25067 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.7■□□□□ 0.1
COL8A2P25067 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.7■□□□□ 0.1
COL8A2P25067 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 NEFHP1-201ENST00000412845 2629 ntBASIC15.7■□□□□ 0.1
COL8A2P25067 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.7■□□□□ 0.1
COL8A2P25067 AL049812.1-201ENST00000432563 2267 ntBASIC15.7■□□□□ 0.1
COL8A2P25067 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
COL8A2P25067 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
COL8A2P25067 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
COL8A2P25067 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.69■□□□□ 0.1
COL8A2P25067 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms