Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFEP18615 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFEP18615 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
NELFEP18615 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.38■□□□□ 0.53
NELFEP18615 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFEP18615 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.38■□□□□ 0.53
NELFEP18615 AC007663.1-201ENST00000438948 1240 ntBASIC18.38■□□□□ 0.53
NELFEP18615 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.38■□□□□ 0.53
NELFEP18615 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NELFEP18615 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.38■□□□□ 0.53
NELFEP18615 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NELFEP18615 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.38■□□□□ 0.53
NELFEP18615 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFEP18615 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NELFEP18615 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NELFEP18615 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFEP18615 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NELFEP18615 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFEP18615 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.38■□□□□ 0.53
NELFEP18615 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFEP18615 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NELFEP18615 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NELFEP18615 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NELFEP18615 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.37■□□□□ 0.53
NELFEP18615 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NELFEP18615 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NELFEP18615 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NELFEP18615 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NELFEP18615 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.37■□□□□ 0.53
NELFEP18615 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NELFEP18615 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NELFEP18615 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.37■□□□□ 0.53
NELFEP18615 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
NELFEP18615 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.37■□□□□ 0.53
NELFEP18615 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.37■□□□□ 0.53
NELFEP18615 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NELFEP18615 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.37■□□□□ 0.53
NELFEP18615 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.37■□□□□ 0.53
NELFEP18615 AC104076.2-201ENST00000448912 469 ntBASIC18.37■□□□□ 0.53
NELFEP18615 KRT18P35-201ENST00000510488 1269 ntBASIC18.37■□□□□ 0.53
NELFEP18615 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.37■□□□□ 0.53
NELFEP18615 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.37■□□□□ 0.53
NELFEP18615 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NELFEP18615 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NELFEP18615 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NELFEP18615 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.37■□□□□ 0.53
NELFEP18615 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.37■□□□□ 0.53
NELFEP18615 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.37■□□□□ 0.53
NELFEP18615 AP000997.3-201ENST00000623333 2250 ntBASIC18.37■□□□□ 0.53
NELFEP18615 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NELFEP18615 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NELFEP18615 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NELFEP18615 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NELFEP18615 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NELFEP18615 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.36■□□□□ 0.53
NELFEP18615 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.36■□□□□ 0.53
NELFEP18615 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.36■□□□□ 0.53
NELFEP18615 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NELFEP18615 PRSS44-201ENST00000515154 1146 ntBASIC18.36■□□□□ 0.53
NELFEP18615 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.36■□□□□ 0.53
NELFEP18615 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
NELFEP18615 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.36■□□□□ 0.53
NELFEP18615 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.36■□□□□ 0.53
NELFEP18615 AL353719.1-201ENST00000566847 864 ntBASIC18.36■□□□□ 0.53
NELFEP18615 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.36■□□□□ 0.53
NELFEP18615 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NELFEP18615 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.36■□□□□ 0.53
NELFEP18615 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.36■□□□□ 0.53
NELFEP18615 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NELFEP18615 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFEP18615 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NELFEP18615 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NELFEP18615 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NELFEP18615 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
NELFEP18615 AC104417.2-201ENST00000562989 1793 ntBASIC18.35■□□□□ 0.53
NELFEP18615 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NELFEP18615 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.35■□□□□ 0.53
NELFEP18615 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NELFEP18615 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.35■□□□□ 0.53
NELFEP18615 KRT8P11-201ENST00000409686 1436 ntBASIC18.35■□□□□ 0.53
NELFEP18615 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms