Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.14■□□□□ 0.65
ERCC2P18074 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.14■□□□□ 0.65
ERCC2P18074 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC2P18074 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC2P18074 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.14■□□□□ 0.65
ERCC2P18074 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
ERCC2P18074 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.14■□□□□ 0.65
ERCC2P18074 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC2P18074 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC2P18074 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC2P18074 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC2P18074 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC2P18074 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
ERCC2P18074 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC2P18074 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC2P18074 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC2P18074 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC2P18074 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ERCC2P18074 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC2P18074 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.14■□□□□ 0.65
ERCC2P18074 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.14■□□□□ 0.65
ERCC2P18074 AC073592.3-201ENST00000625118 1834 ntBASIC19.14■□□□□ 0.65
ERCC2P18074 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 AC090164.3-201ENST00000610780 2143 ntBASIC19.13■□□□□ 0.65
ERCC2P18074 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ERCC2P18074 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ERCC2P18074 SLC25A3P1-201ENST00000443844 931 ntBASIC19.13■□□□□ 0.65
ERCC2P18074 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.13■□□□□ 0.65
ERCC2P18074 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.13■□□□□ 0.65
ERCC2P18074 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.13■□□□□ 0.65
ERCC2P18074 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.13■□□□□ 0.65
ERCC2P18074 KRT8P50-201ENST00000562022 1438 ntBASIC19.13■□□□□ 0.65
ERCC2P18074 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
ERCC2P18074 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 MYLKP1-201ENST00000509077 1580 ntBASIC19.13■□□□□ 0.65
ERCC2P18074 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.13■□□□□ 0.65
ERCC2P18074 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ERCC2P18074 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
ERCC2P18074 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ERCC2P18074 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ERCC2P18074 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC2P18074 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC2P18074 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 HOXB1-202ENST00000577092 1414 ntBASIC19.12■□□□□ 0.65
ERCC2P18074 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.12■□□□□ 0.65
ERCC2P18074 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
ERCC2P18074 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
ERCC2P18074 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 AC211429.1-201ENST00000415277 523 ntBASIC19.12■□□□□ 0.65
ERCC2P18074 KRT18P23-201ENST00000435622 1283 ntBASIC19.12■□□□□ 0.65
ERCC2P18074 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC2P18074 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC2P18074 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC2P18074 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC2P18074 AL512604.3-201ENST00000569583 964 ntBASIC19.12■□□□□ 0.65
ERCC2P18074 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC2P18074 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.12■□□□□ 0.65
ERCC2P18074 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC2P18074 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ERCC2P18074 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ERCC2P18074 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.12■□□□□ 0.65
ERCC2P18074 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC2P18074 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.11■□□□□ 0.65
ERCC2P18074 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC2P18074 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.11■□□□□ 0.65
ERCC2P18074 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms