Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.54■□□□□ 0.4
RAB40ALP0C0E4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 DUSP5P1-201ENST00000441325 1139 ntBASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 BX276092.5-203ENST00000456199 560 ntBASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 CLEC4GP1-201ENST00000596555 870 ntBASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 AL136038.4-201ENST00000603606 1261 ntBASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 AC079602.3-201ENST00000623931 403 ntBASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40ALP0C0E4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 AC008556.1-201ENST00000610908 2040 ntBASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 AC005332.7-201ENST00000614046 2005 ntBASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 AL450487.1-201ENST00000426799 995 ntBASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RAB40ALP0C0E4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAB40ALP0C0E4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
RAB40ALP0C0E4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAB40ALP0C0E4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAB40ALP0C0E4 AL391807.1-203ENST00000604392 2365 ntBASIC17.52■□□□□ 0.39
RAB40ALP0C0E4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAB40ALP0C0E4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RAB40ALP0C0E4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
RAB40ALP0C0E4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RAB40ALP0C0E4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RAB40ALP0C0E4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 MIR662-201ENST00000384847 95 ntBASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 TSSC2-201ENST00000450217 709 ntBASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 MIR3180-4-201ENST00000582223 153 ntBASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 AC093525.10-201ENST00000625130 1569 ntBASIC17.51■□□□□ 0.39
RAB40ALP0C0E4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms