Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP3P08254 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MMP3P08254 AL353692.3-201ENST00000407031 1396 ntBASIC20.59■□□□□ 0.89
MMP3P08254 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP3P08254 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP3P08254 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
MMP3P08254 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.59■□□□□ 0.89
MMP3P08254 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MMP3P08254 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP3P08254 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP3P08254 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MMP3P08254 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
MMP3P08254 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MMP3P08254 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.59■□□□□ 0.89
MMP3P08254 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP3P08254 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MMP3P08254 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MMP3P08254 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MMP3P08254 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.59■□□□□ 0.89
MMP3P08254 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
MMP3P08254 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.59■□□□□ 0.89
MMP3P08254 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.59■□□□□ 0.89
MMP3P08254 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MMP3P08254 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.58■□□□□ 0.89
MMP3P08254 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MMP3P08254 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MMP3P08254 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MMP3P08254 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MMP3P08254 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
MMP3P08254 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
MMP3P08254 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MMP3P08254 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MMP3P08254 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
MMP3P08254 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
MMP3P08254 IGHV3-47-201ENST00000425060 335 ntBASIC20.58■□□□□ 0.89
MMP3P08254 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.58■□□□□ 0.89
MMP3P08254 AC079781.3-201ENST00000449110 356 ntBASIC20.58■□□□□ 0.89
MMP3P08254 AC009078.2-202ENST00000463353 338 ntBASIC20.58■□□□□ 0.89
MMP3P08254 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MMP3P08254 AC099336.1-202ENST00000602961 463 ntBASIC20.58■□□□□ 0.89
MMP3P08254 AC104692.2-201ENST00000603054 253 ntBASIC20.58■□□□□ 0.89
MMP3P08254 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
MMP3P08254 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MMP3P08254 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MMP3P08254 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MMP3P08254 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.58■□□□□ 0.88
MMP3P08254 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MMP3P08254 AL163051.1-201ENST00000569214 1512 ntBASIC20.58■□□□□ 0.88
MMP3P08254 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.57■□□□□ 0.88
MMP3P08254 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.57■□□□□ 0.88
MMP3P08254 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.57■□□□□ 0.88
MMP3P08254 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.57■□□□□ 0.88
MMP3P08254 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 AP000593.1-201ENST00000393668 712 ntBASIC20.57■□□□□ 0.88
MMP3P08254 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.57■□□□□ 0.88
MMP3P08254 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.57■□□□□ 0.88
MMP3P08254 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.57■□□□□ 0.88
MMP3P08254 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.57■□□□□ 0.88
MMP3P08254 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.57■□□□□ 0.88
MMP3P08254 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.57■□□□□ 0.88
MMP3P08254 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
MMP3P08254 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP3P08254 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
MMP3P08254 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MMP3P08254 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MMP3P08254 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MMP3P08254 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP3P08254 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP3P08254 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.56■□□□□ 0.88
MMP3P08254 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.56■□□□□ 0.88
MMP3P08254 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.56■□□□□ 0.88
MMP3P08254 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.56■□□□□ 0.88
MMP3P08254 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.56■□□□□ 0.88
MMP3P08254 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.56■□□□□ 0.88
MMP3P08254 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP3P08254 AP005901.3-202ENST00000581653 237 ntBASIC20.56■□□□□ 0.88
MMP3P08254 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.56■□□□□ 0.88
MMP3P08254 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.56■□□□□ 0.88
MMP3P08254 LINC01711-201ENST00000598340 967 ntBASIC20.56■□□□□ 0.88
MMP3P08254 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
MMP3P08254 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MMP3P08254 AL161938.1-201ENST00000569833 2180 ntBASIC20.56■□□□□ 0.88
MMP3P08254 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.56■□□□□ 0.88
MMP3P08254 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms