Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL1A2P08123 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL1A2P08123 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL1A2P08123 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL1A2P08123 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL1A2P08123 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL1A2P08123 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL1A2P08123 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL1A2P08123 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.4■□□□□ 0.86
COL1A2P08123 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.4■□□□□ 0.86
COL1A2P08123 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.4■□□□□ 0.86
COL1A2P08123 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.4■□□□□ 0.86
COL1A2P08123 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL1A2P08123 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
COL1A2P08123 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL1A2P08123 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL1A2P08123 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.4■□□□□ 0.86
COL1A2P08123 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL1A2P08123 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
COL1A2P08123 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COL1A2P08123 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL1A2P08123 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL1A2P08123 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL1A2P08123 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL1A2P08123 AC112777.1-201ENST00000540175 1423 ntBASIC20.39■□□□□ 0.86
COL1A2P08123 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COL1A2P08123 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL1A2P08123 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL1A2P08123 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL1A2P08123 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.39■□□□□ 0.85
COL1A2P08123 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL1A2P08123 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
COL1A2P08123 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL1A2P08123 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL1A2P08123 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL1A2P08123 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL1A2P08123 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.39■□□□□ 0.85
COL1A2P08123 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.39■□□□□ 0.85
COL1A2P08123 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.39■□□□□ 0.85
COL1A2P08123 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
COL1A2P08123 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.39■□□□□ 0.85
COL1A2P08123 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.39■□□□□ 0.85
COL1A2P08123 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.39■□□□□ 0.85
COL1A2P08123 AC012313.10-201ENST00000623509 926 ntBASIC20.39■□□□□ 0.85
COL1A2P08123 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
COL1A2P08123 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL1A2P08123 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL1A2P08123 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.39■□□□□ 0.85
COL1A2P08123 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL1A2P08123 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL1A2P08123 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL1A2P08123 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.38■□□□□ 0.85
COL1A2P08123 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL1A2P08123 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.38■□□□□ 0.85
COL1A2P08123 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.38■□□□□ 0.85
COL1A2P08123 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL1A2P08123 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.38■□□□□ 0.85
COL1A2P08123 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL1A2P08123 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.38■□□□□ 0.85
COL1A2P08123 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COL1A2P08123 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.38■□□□□ 0.85
COL1A2P08123 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL1A2P08123 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
COL1A2P08123 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.38■□□□□ 0.85
COL1A2P08123 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL1A2P08123 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.38■□□□□ 0.85
COL1A2P08123 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL1A2P08123 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL1A2P08123 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL1A2P08123 SLC25A24-204ENST00000569674 2357 ntBASIC20.37■□□□□ 0.85
COL1A2P08123 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A2P08123 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A2P08123 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A2P08123 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
COL1A2P08123 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A2P08123 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A2P08123 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A2P08123 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.37■□□□□ 0.85
COL1A2P08123 PRELID1P1-202ENST00000567272 903 ntBASIC20.37■□□□□ 0.85
COL1A2P08123 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.37■□□□□ 0.85
COL1A2P08123 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A2P08123 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.37■□□□□ 0.85
COL1A2P08123 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A2P08123 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A2P08123 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A2P08123 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.37■□□□□ 0.85
COL1A2P08123 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A2P08123 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A2P08123 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
COL1A2P08123 AC009102.3-201ENST00000623118 1491 ntBASIC20.37■□□□□ 0.85
COL1A2P08123 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.37■□□□□ 0.85
COL1A2P08123 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
COL1A2P08123 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A2P08123 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A2P08123 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
COL1A2P08123 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
COL1A2P08123 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.36■□□□□ 0.85
COL1A2P08123 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.36■□□□□ 0.85
COL1A2P08123 AC008687.5-201ENST00000593746 558 ntBASIC20.36■□□□□ 0.85
COL1A2P08123 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms