Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC24.45■■□□□ 1.51
COL5A2P05997 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
COL5A2P05997 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
COL5A2P05997 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL5A2P05997 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL5A2P05997 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC24.45■■□□□ 1.5
COL5A2P05997 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
COL5A2P05997 TP73-AS1-210ENST00000637775 1455 ntBASIC24.45■■□□□ 1.5
COL5A2P05997 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC24.45■■□□□ 1.5
COL5A2P05997 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
COL5A2P05997 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL5A2P05997 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL5A2P05997 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL5A2P05997 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL5A2P05997 MIR940-201ENST00000401276 94 ntBASIC24.45■■□□□ 1.5
COL5A2P05997 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC24.45■■□□□ 1.5
COL5A2P05997 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC24.45■■□□□ 1.5
COL5A2P05997 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC24.45■■□□□ 1.5
COL5A2P05997 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC24.45■■□□□ 1.5
COL5A2P05997 LINC01006-201ENST00000333319 2292 ntBASIC24.45■■□□□ 1.5
COL5A2P05997 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL5A2P05997 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC24.44■■□□□ 1.5
COL5A2P05997 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL5A2P05997 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC24.44■■□□□ 1.5
COL5A2P05997 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL5A2P05997 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL5A2P05997 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
COL5A2P05997 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL5A2P05997 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL5A2P05997 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC24.44■■□□□ 1.5
COL5A2P05997 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL5A2P05997 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC24.44■■□□□ 1.5
COL5A2P05997 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.44■■□□□ 1.5
COL5A2P05997 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC24.44■■□□□ 1.5
COL5A2P05997 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL5A2P05997 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC24.44■■□□□ 1.5
COL5A2P05997 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC24.44■■□□□ 1.5
COL5A2P05997 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
COL5A2P05997 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC24.44■■□□□ 1.5
COL5A2P05997 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
COL5A2P05997 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL5A2P05997 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC24.43■■□□□ 1.5
COL5A2P05997 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL5A2P05997 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL5A2P05997 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.43■■□□□ 1.5
COL5A2P05997 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC24.43■■□□□ 1.5
COL5A2P05997 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
COL5A2P05997 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL5A2P05997 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL5A2P05997 HEIH-201ENST00000623091 1652 ntBASIC24.43■■□□□ 1.5
COL5A2P05997 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC24.43■■□□□ 1.5
COL5A2P05997 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL5A2P05997 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL5A2P05997 AC125437.2-201ENST00000625180 2167 ntBASIC24.43■■□□□ 1.5
COL5A2P05997 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL5A2P05997 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL5A2P05997 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL5A2P05997 HMGN1P19-201ENST00000436976 333 ntBASIC24.43■■□□□ 1.5
COL5A2P05997 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC24.43■■□□□ 1.5
COL5A2P05997 MEG3-211ENST00000452514 461 ntTSL 3 BASIC24.43■■□□□ 1.5
COL5A2P05997 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC24.43■■□□□ 1.5
COL5A2P05997 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC24.43■■□□□ 1.5
COL5A2P05997 CD63-204ENST00000546939 779 ntTSL 3 BASIC24.43■■□□□ 1.5
COL5A2P05997 MTDHP3-201ENST00000594186 672 ntBASIC24.43■■□□□ 1.5
COL5A2P05997 AC140113.2-201ENST00000604370 208 ntBASIC24.43■■□□□ 1.5
COL5A2P05997 AC055717.3-201ENST00000622967 595 ntBASIC24.43■■□□□ 1.5
COL5A2P05997 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.43■■□□□ 1.5
COL5A2P05997 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL5A2P05997 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL5A2P05997 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC24.42■■□□□ 1.5
COL5A2P05997 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
COL5A2P05997 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL5A2P05997 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL5A2P05997 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL5A2P05997 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL5A2P05997 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
COL5A2P05997 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
COL5A2P05997 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC24.42■■□□□ 1.5
COL5A2P05997 AC034105.1-201ENST00000563488 319 ntBASIC24.42■■□□□ 1.5
COL5A2P05997 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC24.42■■□□□ 1.5
COL5A2P05997 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC24.42■■□□□ 1.5
COL5A2P05997 HOTTIP_1.1-201ENST00000620415 57 ntBASIC24.42■■□□□ 1.5
COL5A2P05997 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC24.42■■□□□ 1.5
COL5A2P05997 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL5A2P05997 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL5A2P05997 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL5A2P05997 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL5A2P05997 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC24.42■■□□□ 1.5
COL5A2P05997 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
COL5A2P05997 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL5A2P05997 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL5A2P05997 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL5A2P05997 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
COL5A2P05997 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL5A2P05997 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
COL5A2P05997 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC24.41■■□□□ 1.5
COL5A2P05997 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL5A2P05997 AL691403.2-201ENST00000618460 490 ntBASIC24.41■■□□□ 1.5
COL5A2P05997 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL5A2P05997 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms