Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
TCRAP04437 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRAP04437 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.19□□□□□ -0.14
TCRAP04437 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRAP04437 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TCRAP04437 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.19□□□□□ -0.14
TCRAP04437 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.19□□□□□ -0.14
TCRAP04437 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TCRAP04437 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TCRAP04437 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRAP04437 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRAP04437 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TCRAP04437 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRAP04437 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRAP04437 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRAP04437 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRAP04437 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.18□□□□□ -0.14
TCRAP04437 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.18□□□□□ -0.14
TCRAP04437 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.18□□□□□ -0.14
TCRAP04437 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.18□□□□□ -0.14
TCRAP04437 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.18□□□□□ -0.14
TCRAP04437 HLA-A-209ENST00000638375 975 ntBASIC14.18□□□□□ -0.14
TCRAP04437 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRAP04437 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRAP04437 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRAP04437 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TCRAP04437 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TCRAP04437 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRAP04437 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TCRAP04437 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.18□□□□□ -0.14
TCRAP04437 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TCRAP04437 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.17□□□□□ -0.14
TCRAP04437 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TCRAP04437 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC14.17□□□□□ -0.14
TCRAP04437 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TCRAP04437 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TCRAP04437 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.17□□□□□ -0.14
TCRAP04437 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TCRAP04437 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
TCRAP04437 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.17□□□□□ -0.14
TCRAP04437 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TCRAP04437 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRAP04437 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.17□□□□□ -0.14
TCRAP04437 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.17□□□□□ -0.14
TCRAP04437 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.17□□□□□ -0.14
TCRAP04437 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.17□□□□□ -0.14
TCRAP04437 PNMA6B-201ENST00000538162 1200 ntBASIC14.17□□□□□ -0.14
TCRAP04437 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
TCRAP04437 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TCRAP04437 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 AC073111.5-205ENST00000641717 521 ntBASIC14.17□□□□□ -0.14
TCRAP04437 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRAP04437 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TCRAP04437 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.17□□□□□ -0.14
TCRAP04437 PRORSD1P-202ENST00000563365 2154 ntBASIC14.17□□□□□ -0.14
TCRAP04437 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.17□□□□□ -0.14
TCRAP04437 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TCRAP04437 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TCRAP04437 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 KRT8P45-201ENST00000414328 1447 ntBASIC14.16□□□□□ -0.14
TCRAP04437 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.16□□□□□ -0.14
TCRAP04437 AC139713.2-201ENST00000641328 2723 ntBASIC14.16□□□□□ -0.14
TCRAP04437 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TCRAP04437 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms