Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.3■□□□□ 0.2
LCATP04180 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.3■□□□□ 0.2
LCATP04180 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
LCATP04180 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.3■□□□□ 0.2
LCATP04180 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.3■□□□□ 0.2
LCATP04180 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.3■□□□□ 0.2
LCATP04180 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LCATP04180 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.3■□□□□ 0.2
LCATP04180 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.3■□□□□ 0.2
LCATP04180 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LCATP04180 AC104581.1-202ENST00000635932 2618 ntBASIC16.3■□□□□ 0.2
LCATP04180 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.3■□□□□ 0.2
LCATP04180 RCC2P3-201ENST00000418112 1537 ntBASIC16.29■□□□□ 0.2
LCATP04180 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.29■□□□□ 0.2
LCATP04180 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.29■□□□□ 0.2
LCATP04180 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
LCATP04180 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LCATP04180 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.29■□□□□ 0.2
LCATP04180 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
LCATP04180 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.29■□□□□ 0.2
LCATP04180 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.29■□□□□ 0.2
LCATP04180 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.29■□□□□ 0.2
LCATP04180 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.29■□□□□ 0.2
LCATP04180 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 MIR4785-201ENST00000585005 73 ntBASIC16.29■□□□□ 0.2
LCATP04180 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
LCATP04180 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.29■□□□□ 0.2
LCATP04180 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LCATP04180 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
LCATP04180 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
LCATP04180 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.29■□□□□ 0.2
LCATP04180 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.29■□□□□ 0.2
LCATP04180 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LCATP04180 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.29■□□□□ 0.2
LCATP04180 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LCATP04180 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.28■□□□□ 0.2
LCATP04180 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LCATP04180 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.28■□□□□ 0.2
LCATP04180 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 AC005082.1-201ENST00000413042 2259 ntBASIC16.28■□□□□ 0.2
LCATP04180 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LCATP04180 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.28■□□□□ 0.2
LCATP04180 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LCATP04180 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LCATP04180 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LCATP04180 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
LCATP04180 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.28■□□□□ 0.2
LCATP04180 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.28■□□□□ 0.2
LCATP04180 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
LCATP04180 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LCATP04180 MTMR9LP-203ENST00000426597 1545 ntBASIC16.28■□□□□ 0.2
LCATP04180 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
LCATP04180 AC026471.1-201ENST00000564629 3026 ntBASIC16.28■□□□□ 0.2
LCATP04180 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LCATP04180 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms