Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 METTL21AP1-201ENST00000438852 635 ntBASIC11.59□□□□□ -0.55
APOBP04114 LHX6-205ENST00000464484 666 ntTSL 2 BASIC11.59□□□□□ -0.55
APOBP04114 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOBP04114 AC104390.1-201ENST00000555663 520 ntBASIC11.59□□□□□ -0.55
APOBP04114 MIR3687-2-201ENST00000577708 61 ntBASIC11.59□□□□□ -0.55
APOBP04114 MIR3687-1-201ENST00000614492 61 ntBASIC11.59□□□□□ -0.55
APOBP04114 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
APOBP04114 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC11.59□□□□□ -0.55
APOBP04114 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOBP04114 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
APOBP04114 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC11.59□□□□□ -0.55
APOBP04114 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOBP04114 AC099343.3-201ENST00000605834 2503 ntBASIC11.59□□□□□ -0.55
APOBP04114 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC11.59□□□□□ -0.55
APOBP04114 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
APOBP04114 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOBP04114 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC11.59□□□□□ -0.55
APOBP04114 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11.59□□□□□ -0.55
APOBP04114 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.59□□□□□ -0.55
APOBP04114 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC11.59□□□□□ -0.55
APOBP04114 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC11.59□□□□□ -0.55
APOBP04114 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
APOBP04114 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOBP04114 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
APOBP04114 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.59□□□□□ -0.55
APOBP04114 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.59□□□□□ -0.55
APOBP04114 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.59□□□□□ -0.55
APOBP04114 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
APOBP04114 AC006333.2-201ENST00000607957 2099 ntBASIC11.58□□□□□ -0.55
APOBP04114 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
APOBP04114 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
APOBP04114 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
APOBP04114 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
APOBP04114 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
APOBP04114 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC11.58□□□□□ -0.56
APOBP04114 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC11.58□□□□□ -0.56
APOBP04114 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC11.58□□□□□ -0.56
APOBP04114 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
APOBP04114 RCN1P2-201ENST00000398357 915 ntBASIC11.58□□□□□ -0.56
APOBP04114 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.58□□□□□ -0.56
APOBP04114 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
APOBP04114 SPCS2P1-201ENST00000561636 679 ntBASIC11.58□□□□□ -0.56
APOBP04114 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
APOBP04114 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC11.58□□□□□ -0.56
APOBP04114 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC11.58□□□□□ -0.56
APOBP04114 AC009947.1-201ENST00000444350 727 ntBASIC11.58□□□□□ -0.56
APOBP04114 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
APOBP04114 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
APOBP04114 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
APOBP04114 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.58□□□□□ -0.56
APOBP04114 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
APOBP04114 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC11.58□□□□□ -0.56
APOBP04114 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
APOBP04114 NUS1P2-201ENST00000417358 873 ntBASIC11.58□□□□□ -0.56
APOBP04114 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.58□□□□□ -0.56
APOBP04114 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
APOBP04114 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
APOBP04114 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC11.57□□□□□ -0.56
APOBP04114 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.57□□□□□ -0.56
APOBP04114 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 AP005117.1-201ENST00000584346 1413 ntBASIC11.57□□□□□ -0.56
APOBP04114 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
APOBP04114 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.57□□□□□ -0.56
APOBP04114 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC11.57□□□□□ -0.56
APOBP04114 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC11.57□□□□□ -0.56
APOBP04114 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.57□□□□□ -0.56
APOBP04114 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.57□□□□□ -0.56
APOBP04114 RBM17P3-201ENST00000417687 1192 ntBASIC11.57□□□□□ -0.56
APOBP04114 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11.57□□□□□ -0.56
APOBP04114 THAP5-204ENST00000438865 868 ntTSL 2 BASIC11.57□□□□□ -0.56
APOBP04114 HLA-J-203ENST00000494367 1087 ntBASIC11.57□□□□□ -0.56
APOBP04114 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.57□□□□□ -0.56
APOBP04114 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.57□□□□□ -0.56
APOBP04114 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC11.57□□□□□ -0.56
APOBP04114 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.57□□□□□ -0.56
APOBP04114 AC021087.4-201ENST00000563761 564 ntBASIC11.57□□□□□ -0.56
APOBP04114 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
APOBP04114 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
APOBP04114 AC125634.1-201ENST00000438758 1403 ntBASIC11.57□□□□□ -0.56
APOBP04114 AC112777.1-201ENST00000540175 1423 ntBASIC11.57□□□□□ -0.56
APOBP04114 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms