Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD4P01730 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD4P01730 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.56■□□□□ 0.88
CD4P01730 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD4P01730 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.56■□□□□ 0.88
CD4P01730 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.56■□□□□ 0.88
CD4P01730 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.56■□□□□ 0.88
CD4P01730 RN7SL606P-201ENST00000472779 293 ntBASIC20.56■□□□□ 0.88
CD4P01730 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.56■□□□□ 0.88
CD4P01730 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.56■□□□□ 0.88
CD4P01730 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.56■□□□□ 0.88
CD4P01730 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.56■□□□□ 0.88
CD4P01730 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.56■□□□□ 0.88
CD4P01730 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.56■□□□□ 0.88
CD4P01730 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CD4P01730 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.56■□□□□ 0.88
CD4P01730 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.56■□□□□ 0.88
CD4P01730 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CD4P01730 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CD4P01730 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CD4P01730 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD4P01730 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CD4P01730 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.55■□□□□ 0.88
CD4P01730 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD4P01730 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.55■□□□□ 0.88
CD4P01730 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD4P01730 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD4P01730 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.55■□□□□ 0.88
CD4P01730 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CD4P01730 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD4P01730 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CD4P01730 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.55■□□□□ 0.88
CD4P01730 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD4P01730 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CD4P01730 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CD4P01730 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CD4P01730 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD4P01730 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CD4P01730 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CD4P01730 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.54■□□□□ 0.88
CD4P01730 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD4P01730 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.54■□□□□ 0.88
CD4P01730 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CD4P01730 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CD4P01730 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.54■□□□□ 0.88
CD4P01730 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CD4P01730 AFG3L1P-217ENST00000557444 2447 ntBASIC20.54■□□□□ 0.88
CD4P01730 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CD4P01730 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CD4P01730 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD4P01730 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CD4P01730 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.54■□□□□ 0.88
CD4P01730 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CD4P01730 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.54■□□□□ 0.88
CD4P01730 MIR564-202ENST00000385049 94 ntBASIC20.54■□□□□ 0.88
CD4P01730 IGHGP-201ENST00000390555 1178 ntBASIC20.54■□□□□ 0.88
CD4P01730 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.54■□□□□ 0.88
CD4P01730 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CD4P01730 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CD4P01730 AC120114.3-201ENST00000611923 658 ntBASIC20.54■□□□□ 0.88
CD4P01730 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CD4P01730 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CD4P01730 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.54■□□□□ 0.88
CD4P01730 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.54■□□□□ 0.88
CD4P01730 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.54■□□□□ 0.88
CD4P01730 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD4P01730 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.53■□□□□ 0.88
CD4P01730 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CD4P01730 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD4P01730 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CD4P01730 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.53■□□□□ 0.88
CD4P01730 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD4P01730 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CD4P01730 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
CD4P01730 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.53■□□□□ 0.88
CD4P01730 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD4P01730 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CD4P01730 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD4P01730 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.53■□□□□ 0.88
CD4P01730 SAPCD2P3-201ENST00000455031 850 ntBASIC20.53■□□□□ 0.88
CD4P01730 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.53■□□□□ 0.88
CD4P01730 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.53■□□□□ 0.88
CD4P01730 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.53■□□□□ 0.88
CD4P01730 RNA5SP419-201ENST00000515908 135 ntBASIC20.53■□□□□ 0.88
CD4P01730 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CD4P01730 MIR3180-4-201ENST00000582223 153 ntBASIC20.53■□□□□ 0.88
CD4P01730 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.53■□□□□ 0.88
CD4P01730 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CD4P01730 AL592071.1-201ENST00000611956 408 ntBASIC20.53■□□□□ 0.88
CD4P01730 REXO1L6P-202ENST00000619970 1078 ntBASIC20.53■□□□□ 0.88
CD4P01730 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.53■□□□□ 0.88
CD4P01730 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD4P01730 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.53■□□□□ 0.88
CD4P01730 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD4P01730 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.53■□□□□ 0.88
CD4P01730 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
CD4P01730 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CD4P01730 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CD4P01730 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
CD4P01730 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms