Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ALDH1A1P00352 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ALDH1A1P00352 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ALDH1A1P00352 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.99
ALDH1A1P00352 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
ALDH1A1P00352 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.2■□□□□ 0.99
ALDH1A1P00352 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ALDH1A1P00352 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ALDH1A1P00352 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ALDH1A1P00352 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ALDH1A1P00352 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.2■□□□□ 0.98
ALDH1A1P00352 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.2■□□□□ 0.98
ALDH1A1P00352 AC004832.2-201ENST00000426397 482 ntBASIC21.2■□□□□ 0.98
ALDH1A1P00352 RPS2P1-201ENST00000434010 821 ntBASIC21.2■□□□□ 0.98
ALDH1A1P00352 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ALDH1A1P00352 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC21.2■□□□□ 0.98
ALDH1A1P00352 RNA5SP416-201ENST00000516838 111 ntBASIC21.2■□□□□ 0.98
ALDH1A1P00352 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC21.2■□□□□ 0.98
ALDH1A1P00352 OR7E14P-202ENST00000530490 1290 ntBASIC21.2■□□□□ 0.98
ALDH1A1P00352 MIR3197-201ENST00000582241 73 ntBASIC21.2■□□□□ 0.98
ALDH1A1P00352 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.2■□□□□ 0.98
ALDH1A1P00352 AC008687.5-201ENST00000593746 558 ntBASIC21.2■□□□□ 0.98
ALDH1A1P00352 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ALDH1A1P00352 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ALDH1A1P00352 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.2■□□□□ 0.98
ALDH1A1P00352 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.98
ALDH1A1P00352 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ALDH1A1P00352 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.2■□□□□ 0.98
ALDH1A1P00352 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.2■□□□□ 0.98
ALDH1A1P00352 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.2■□□□□ 0.98
ALDH1A1P00352 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ALDH1A1P00352 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.19■□□□□ 0.98
ALDH1A1P00352 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
ALDH1A1P00352 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALDH1A1P00352 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALDH1A1P00352 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
ALDH1A1P00352 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.19■□□□□ 0.98
ALDH1A1P00352 RNA5SP415-201ENST00000517246 115 ntBASIC21.19■□□□□ 0.98
ALDH1A1P00352 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALDH1A1P00352 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.19■□□□□ 0.98
ALDH1A1P00352 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.19■□□□□ 0.98
ALDH1A1P00352 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.19■□□□□ 0.98
ALDH1A1P00352 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
ALDH1A1P00352 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.19■□□□□ 0.98
ALDH1A1P00352 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ALDH1A1P00352 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALDH1A1P00352 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ALDH1A1P00352 AP005117.1-201ENST00000584346 1413 ntBASIC21.19■□□□□ 0.98
ALDH1A1P00352 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALDH1A1P00352 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALDH1A1P00352 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ALDH1A1P00352 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ALDH1A1P00352 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ALDH1A1P00352 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.18■□□□□ 0.98
ALDH1A1P00352 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.18■□□□□ 0.98
ALDH1A1P00352 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
ALDH1A1P00352 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ALDH1A1P00352 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ALDH1A1P00352 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ALDH1A1P00352 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ALDH1A1P00352 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ALDH1A1P00352 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ALDH1A1P00352 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ALDH1A1P00352 AC002347.1-201ENST00000569543 541 ntBASIC21.18■□□□□ 0.98
ALDH1A1P00352 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ALDH1A1P00352 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ALDH1A1P00352 AC073314.1-201ENST00000568729 2216 ntBASIC21.18■□□□□ 0.98
ALDH1A1P00352 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ALDH1A1P00352 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ALDH1A1P00352 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ALDH1A1P00352 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ALDH1A1P00352 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ALDH1A1P00352 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ALDH1A1P00352 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ALDH1A1P00352 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.18■□□□□ 0.98
ALDH1A1P00352 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ALDH1A1P00352 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALDH1A1P00352 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALDH1A1P00352 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALDH1A1P00352 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALDH1A1P00352 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ALDH1A1P00352 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALDH1A1P00352 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALDH1A1P00352 INIP-202ENST00000374236 874 ntTSL 2 BASIC21.17■□□□□ 0.98
ALDH1A1P00352 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALDH1A1P00352 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.17■□□□□ 0.98
ALDH1A1P00352 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.17■□□□□ 0.98
ALDH1A1P00352 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.17■□□□□ 0.98
ALDH1A1P00352 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.17■□□□□ 0.98
ALDH1A1P00352 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.17■□□□□ 0.98
ALDH1A1P00352 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ALDH1A1P00352 AC005336.2-201ENST00000593183 939 ntBASIC21.17■□□□□ 0.98
ALDH1A1P00352 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.17■□□□□ 0.98
ALDH1A1P00352 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALDH1A1P00352 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC21.17■□□□□ 0.98
ALDH1A1P00352 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALDH1A1P00352 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.17■□□□□ 0.98
ALDH1A1P00352 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.17■□□□□ 0.98
ALDH1A1P00352 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.17■□□□□ 0.98
ALDH1A1P00352 Z82202.1-201ENST00000623446 1880 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms