Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.54■□□□□ 0.24
CNOT4O95628 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CNOT4O95628 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.54■□□□□ 0.24
CNOT4O95628 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.54■□□□□ 0.24
CNOT4O95628 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.54■□□□□ 0.24
CNOT4O95628 AC116562.4-201ENST00000641316 2276 ntBASIC16.54■□□□□ 0.24
CNOT4O95628 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
CNOT4O95628 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.54■□□□□ 0.24
CNOT4O95628 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNOT4O95628 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CNOT4O95628 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CNOT4O95628 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.53■□□□□ 0.24
CNOT4O95628 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT4O95628 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
CNOT4O95628 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT4O95628 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
CNOT4O95628 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CNOT4O95628 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.53■□□□□ 0.24
CNOT4O95628 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.53■□□□□ 0.24
CNOT4O95628 HOMER2P1-201ENST00000455653 964 ntBASIC16.53■□□□□ 0.24
CNOT4O95628 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 YBX1P2-201ENST00000489612 999 ntBASIC16.53■□□□□ 0.24
CNOT4O95628 AC022616.7-201ENST00000525383 220 ntBASIC16.53■□□□□ 0.24
CNOT4O95628 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT4O95628 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT4O95628 AC140113.3-201ENST00000605663 199 ntBASIC16.53■□□□□ 0.24
CNOT4O95628 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT4O95628 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CNOT4O95628 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.53■□□□□ 0.24
CNOT4O95628 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.53■□□□□ 0.24
CNOT4O95628 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CNOT4O95628 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CNOT4O95628 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNOT4O95628 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT4O95628 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT4O95628 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT4O95628 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.52■□□□□ 0.24
CNOT4O95628 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT4O95628 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT4O95628 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT4O95628 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CNOT4O95628 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT4O95628 RCC2P3-201ENST00000418112 1537 ntBASIC16.52■□□□□ 0.24
CNOT4O95628 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT4O95628 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CNOT4O95628 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT4O95628 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT4O95628 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT4O95628 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.52■□□□□ 0.24
CNOT4O95628 AC117947.1-201ENST00000427448 529 ntBASIC16.52■□□□□ 0.24
CNOT4O95628 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CNOT4O95628 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.52■□□□□ 0.24
CNOT4O95628 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.52■□□□□ 0.24
CNOT4O95628 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNOT4O95628 AL358472.4-201ENST00000633140 710 ntBASIC16.52■□□□□ 0.24
CNOT4O95628 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNOT4O95628 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CNOT4O95628 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.52■□□□□ 0.23
CNOT4O95628 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNOT4O95628 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.52■□□□□ 0.23
CNOT4O95628 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNOT4O95628 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNOT4O95628 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CNOT4O95628 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNOT4O95628 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.52■□□□□ 0.23
CNOT4O95628 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CNOT4O95628 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.52■□□□□ 0.23
CNOT4O95628 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CNOT4O95628 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms