Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PRAMEF1O95521 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PRAMEF1O95521 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.51■□□□□ 0.55
PRAMEF1O95521 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF1O95521 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.5■□□□□ 0.55
PRAMEF1O95521 AC112777.1-201ENST00000540175 1423 ntBASIC18.5■□□□□ 0.55
PRAMEF1O95521 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF1O95521 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF1O95521 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF1O95521 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF1O95521 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF1O95521 TERF1P1-201ENST00000311003 1181 ntBASIC18.5■□□□□ 0.55
PRAMEF1O95521 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF1O95521 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
PRAMEF1O95521 AL137013.1-201ENST00000432946 1228 ntBASIC18.5■□□□□ 0.55
PRAMEF1O95521 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF1O95521 KRT18P41-201ENST00000518924 1277 ntBASIC18.5■□□□□ 0.55
PRAMEF1O95521 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.5■□□□□ 0.55
PRAMEF1O95521 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.5■□□□□ 0.55
PRAMEF1O95521 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PRAMEF1O95521 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF1O95521 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF1O95521 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF1O95521 AC126763.1-201ENST00000552015 2118 ntBASIC18.5■□□□□ 0.55
PRAMEF1O95521 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF1O95521 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF1O95521 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.5■□□□□ 0.55
PRAMEF1O95521 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF1O95521 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PRAMEF1O95521 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.49■□□□□ 0.55
PRAMEF1O95521 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.49■□□□□ 0.55
PRAMEF1O95521 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.49■□□□□ 0.55
PRAMEF1O95521 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 KRT18P23-201ENST00000435622 1283 ntBASIC18.49■□□□□ 0.55
PRAMEF1O95521 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.49■□□□□ 0.55
PRAMEF1O95521 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.49■□□□□ 0.55
PRAMEF1O95521 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 AL138966.2-201ENST00000621997 464 ntBASIC18.49■□□□□ 0.55
PRAMEF1O95521 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PRAMEF1O95521 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PRAMEF1O95521 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PRAMEF1O95521 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PRAMEF1O95521 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PRAMEF1O95521 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
PRAMEF1O95521 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.49■□□□□ 0.55
PRAMEF1O95521 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.49■□□□□ 0.55
PRAMEF1O95521 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PRAMEF1O95521 HOXB1-202ENST00000577092 1414 ntBASIC18.49■□□□□ 0.55
PRAMEF1O95521 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF1O95521 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF1O95521 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEF1O95521 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF1O95521 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF1O95521 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEF1O95521 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PRAMEF1O95521 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEF1O95521 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF1O95521 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF1O95521 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF1O95521 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.48■□□□□ 0.55
PRAMEF1O95521 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEF1O95521 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.48■□□□□ 0.55
PRAMEF1O95521 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.48■□□□□ 0.55
PRAMEF1O95521 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.48■□□□□ 0.55
PRAMEF1O95521 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.48■□□□□ 0.55
PRAMEF1O95521 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF1O95521 AC112497.1-201ENST00000624824 639 ntBASIC18.48■□□□□ 0.55
PRAMEF1O95521 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.48■□□□□ 0.55
PRAMEF1O95521 AC141257.4-201ENST00000634557 245 ntBASIC18.48■□□□□ 0.55
PRAMEF1O95521 AC136944.6-201ENST00000634818 245 ntBASIC18.48■□□□□ 0.55
PRAMEF1O95521 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF1O95521 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF1O95521 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF1O95521 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF1O95521 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PRAMEF1O95521 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms