Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CBX6O95503 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CBX6O95503 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CBX6O95503 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CBX6O95503 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CBX6O95503 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CBX6O95503 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.55■□□□□ 0.56
CBX6O95503 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.55■□□□□ 0.56
CBX6O95503 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CBX6O95503 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.55■□□□□ 0.56
CBX6O95503 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CBX6O95503 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CBX6O95503 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.55■□□□□ 0.56
CBX6O95503 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.55■□□□□ 0.56
CBX6O95503 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.55■□□□□ 0.56
CBX6O95503 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.55■□□□□ 0.56
CBX6O95503 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CBX6O95503 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.55■□□□□ 0.56
CBX6O95503 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.55■□□□□ 0.56
CBX6O95503 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CBX6O95503 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CBX6O95503 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.55■□□□□ 0.56
CBX6O95503 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CBX6O95503 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.54■□□□□ 0.56
CBX6O95503 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CBX6O95503 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.54■□□□□ 0.56
CBX6O95503 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CBX6O95503 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.54■□□□□ 0.56
CBX6O95503 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CBX6O95503 AC083906.6-201ENST00000641366 219 ntBASIC18.54■□□□□ 0.56
CBX6O95503 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.54■□□□□ 0.56
CBX6O95503 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
CBX6O95503 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.54■□□□□ 0.56
CBX6O95503 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.54■□□□□ 0.56
CBX6O95503 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CBX6O95503 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CBX6O95503 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CBX6O95503 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX6O95503 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX6O95503 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX6O95503 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX6O95503 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX6O95503 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX6O95503 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.53■□□□□ 0.56
CBX6O95503 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.53■□□□□ 0.56
CBX6O95503 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CBX6O95503 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.53■□□□□ 0.56
CBX6O95503 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CBX6O95503 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.53■□□□□ 0.56
CBX6O95503 AC023632.3-201ENST00000521633 145 ntBASIC18.53■□□□□ 0.56
CBX6O95503 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CBX6O95503 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.53■□□□□ 0.56
CBX6O95503 AL162741.1-201ENST00000565563 1558 ntBASIC18.53■□□□□ 0.56
CBX6O95503 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CBX6O95503 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CBX6O95503 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CBX6O95503 MTDHP1-201ENST00000605323 784 ntBASIC18.53■□□□□ 0.56
CBX6O95503 AP001412.1-201ENST00000608405 714 ntBASIC18.53■□□□□ 0.56
CBX6O95503 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX6O95503 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CBX6O95503 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms