Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN3O95197 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN3O95197 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN3O95197 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTN3O95197 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.6■□□□□ 0.73
RTN3O95197 AC116562.4-201ENST00000641316 2276 ntBASIC19.6■□□□□ 0.73
RTN3O95197 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RTN3O95197 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.6■□□□□ 0.73
RTN3O95197 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.6■□□□□ 0.73
RTN3O95197 SEC1P-202ENST00000473944 940 ntBASIC19.6■□□□□ 0.73
RTN3O95197 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 AL121956.5-201ENST00000625261 221 ntBASIC19.6■□□□□ 0.73
RTN3O95197 AC034236.2-201ENST00000606662 1610 ntBASIC19.6■□□□□ 0.73
RTN3O95197 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RTN3O95197 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTN3O95197 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
RTN3O95197 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.6■□□□□ 0.73
RTN3O95197 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RTN3O95197 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RTN3O95197 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RTN3O95197 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 HEIH-201ENST00000623091 1652 ntBASIC19.59■□□□□ 0.73
RTN3O95197 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.59■□□□□ 0.73
RTN3O95197 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.59■□□□□ 0.73
RTN3O95197 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.59■□□□□ 0.73
RTN3O95197 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.59■□□□□ 0.73
RTN3O95197 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 AC112907.2-201ENST00000448639 330 ntBASIC19.59■□□□□ 0.73
RTN3O95197 RASA4DP-201ENST00000460726 1199 ntBASIC19.59■□□□□ 0.73
RTN3O95197 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.59■□□□□ 0.73
RTN3O95197 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.59■□□□□ 0.73
RTN3O95197 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.59■□□□□ 0.73
RTN3O95197 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.59■□□□□ 0.73
RTN3O95197 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RTN3O95197 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.59■□□□□ 0.73
RTN3O95197 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTN3O95197 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN3O95197 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.58■□□□□ 0.73
RTN3O95197 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN3O95197 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
RTN3O95197 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.58■□□□□ 0.73
RTN3O95197 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.58■□□□□ 0.73
RTN3O95197 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
RTN3O95197 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RTN3O95197 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RTN3O95197 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN3O95197 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RTN3O95197 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.58■□□□□ 0.73
RTN3O95197 SPDYE15P-201ENST00000424157 909 ntBASIC19.58■□□□□ 0.72
RTN3O95197 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.58■□□□□ 0.72
RTN3O95197 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RTN3O95197 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.58■□□□□ 0.72
RTN3O95197 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RTN3O95197 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RTN3O95197 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTN3O95197 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.58■□□□□ 0.72
RTN3O95197 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.58■□□□□ 0.72
RTN3O95197 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RTN3O95197 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.58■□□□□ 0.72
RTN3O95197 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.58■□□□□ 0.72
RTN3O95197 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.58■□□□□ 0.72
RTN3O95197 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RTN3O95197 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.58■□□□□ 0.72
RTN3O95197 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RTN3O95197 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.57■□□□□ 0.72
RTN3O95197 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RTN3O95197 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.57■□□□□ 0.72
RTN3O95197 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RTN3O95197 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms