Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
BRD4O60885 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC25.73■■□□□ 1.71
BRD4O60885 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
BRD4O60885 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC25.73■■□□□ 1.71
BRD4O60885 HOXB1-202ENST00000577092 1414 ntBASIC25.73■■□□□ 1.71
BRD4O60885 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
BRD4O60885 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
BRD4O60885 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
BRD4O60885 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
BRD4O60885 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
BRD4O60885 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
BRD4O60885 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
BRD4O60885 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC25.72■■□□□ 1.71
BRD4O60885 AC111152.3-201ENST00000569699 673 ntBASIC25.72■■□□□ 1.71
BRD4O60885 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
BRD4O60885 AL136038.4-201ENST00000603606 1261 ntBASIC25.72■■□□□ 1.71
BRD4O60885 IRF5-214ENST00000613821 595 ntTSL 5 BASIC25.72■■□□□ 1.71
BRD4O60885 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
BRD4O60885 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
BRD4O60885 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
BRD4O60885 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC25.72■■□□□ 1.71
BRD4O60885 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
BRD4O60885 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
BRD4O60885 AL020996.1-203ENST00000536896 2307 ntBASIC25.72■■□□□ 1.71
BRD4O60885 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
BRD4O60885 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC25.71■■□□□ 1.71
BRD4O60885 CHCHD2P8-201ENST00000429873 447 ntBASIC25.71■■□□□ 1.71
BRD4O60885 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC25.71■■□□□ 1.71
BRD4O60885 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC25.71■■□□□ 1.71
BRD4O60885 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
BRD4O60885 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC25.71■■□□□ 1.71
BRD4O60885 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC25.71■■□□□ 1.71
BRD4O60885 PRELID1P1-202ENST00000567272 903 ntBASIC25.71■■□□□ 1.71
BRD4O60885 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC25.71■■□□□ 1.71
BRD4O60885 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
BRD4O60885 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
BRD4O60885 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC25.71■■□□□ 1.71
BRD4O60885 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
BRD4O60885 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
BRD4O60885 AC004408.2-201ENST00000623613 2777 ntBASIC25.71■■□□□ 1.71
BRD4O60885 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC25.71■■□□□ 1.71
BRD4O60885 AL109659.2-201ENST00000606809 1674 ntBASIC25.71■■□□□ 1.71
BRD4O60885 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
BRD4O60885 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
BRD4O60885 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
BRD4O60885 NUS1P1-201ENST00000446295 882 ntBASIC25.7■■□□□ 1.71
BRD4O60885 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
BRD4O60885 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC25.7■■□□□ 1.71
BRD4O60885 AL157888.1-201ENST00000631930 593 ntBASIC25.7■■□□□ 1.71
BRD4O60885 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC25.7■■□□□ 1.71
BRD4O60885 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
BRD4O60885 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
BRD4O60885 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC25.7■■□□□ 1.7
BRD4O60885 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC25.7■■□□□ 1.7
BRD4O60885 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
BRD4O60885 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC25.7■■□□□ 1.7
BRD4O60885 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
BRD4O60885 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC25.7■■□□□ 1.7
BRD4O60885 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
BRD4O60885 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
BRD4O60885 FAAHP1-202ENST00000446499 1238 ntBASIC25.69■■□□□ 1.7
BRD4O60885 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC25.69■■□□□ 1.7
BRD4O60885 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
BRD4O60885 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
BRD4O60885 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
BRD4O60885 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
BRD4O60885 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
BRD4O60885 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
BRD4O60885 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
BRD4O60885 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC25.69■■□□□ 1.7
BRD4O60885 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
BRD4O60885 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
BRD4O60885 AL391807.1-203ENST00000604392 2365 ntBASIC25.69■■□□□ 1.7
BRD4O60885 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
BRD4O60885 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
BRD4O60885 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
BRD4O60885 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC25.69■■□□□ 1.7
BRD4O60885 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC25.69■■□□□ 1.7
BRD4O60885 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
BRD4O60885 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
BRD4O60885 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
BRD4O60885 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
BRD4O60885 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
BRD4O60885 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
BRD4O60885 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC25.68■■□□□ 1.7
BRD4O60885 AL031598.1-201ENST00000561511 1773 ntBASIC25.68■■□□□ 1.7
BRD4O60885 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
BRD4O60885 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC25.68■■□□□ 1.7
BRD4O60885 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
BRD4O60885 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC25.68■■□□□ 1.7
BRD4O60885 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC25.68■■□□□ 1.7
BRD4O60885 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC25.68■■□□□ 1.7
BRD4O60885 AC083906.6-201ENST00000641366 219 ntBASIC25.68■■□□□ 1.7
BRD4O60885 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
BRD4O60885 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
BRD4O60885 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC25.67■■□□□ 1.7
BRD4O60885 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC25.67■■□□□ 1.7
BRD4O60885 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
BRD4O60885 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
BRD4O60885 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms