Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AL109659.2-201ENST00000606809 1674 ntBASIC17.8■□□□□ 0.44
PCDH7O60245 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH7O60245 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDH7O60245 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDH7O60245 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDH7O60245 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDH7O60245 CRYGFP-201ENST00000418459 633 ntBASIC17.8■□□□□ 0.44
PCDH7O60245 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDH7O60245 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDH7O60245 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDH7O60245 AC008550.1-201ENST00000511500 884 ntBASIC17.8■□□□□ 0.44
PCDH7O60245 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDH7O60245 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDH7O60245 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
PCDH7O60245 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 KRT8P45-201ENST00000414328 1447 ntBASIC17.8■□□□□ 0.44
PCDH7O60245 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH7O60245 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.79■□□□□ 0.44
PCDH7O60245 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH7O60245 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 AC008556.1-201ENST00000610908 2040 ntBASIC17.79■□□□□ 0.44
PCDH7O60245 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDH7O60245 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 BICD1-207ENST00000551848 1962 ntBASIC17.79■□□□□ 0.44
PCDH7O60245 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH7O60245 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH7O60245 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDH7O60245 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 MIR718-201ENST00000390190 70 ntBASIC17.79■□□□□ 0.44
PCDH7O60245 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.79■□□□□ 0.44
PCDH7O60245 AP003071.4-201ENST00000562276 1284 ntBASIC17.79■□□□□ 0.44
PCDH7O60245 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.79■□□□□ 0.44
PCDH7O60245 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH7O60245 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDH7O60245 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDH7O60245 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDH7O60245 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH7O60245 AC090340.1-201ENST00000620778 4980 ntBASIC17.79■□□□□ 0.44
PCDH7O60245 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDH7O60245 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PCDH7O60245 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.79■□□□□ 0.44
PCDH7O60245 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH7O60245 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDH7O60245 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH7O60245 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH7O60245 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH7O60245 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH7O60245 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH7O60245 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH7O60245 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH7O60245 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDH7O60245 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH7O60245 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.78■□□□□ 0.44
PCDH7O60245 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDH7O60245 AL023284.2-201ENST00000405850 579 ntBASIC17.78■□□□□ 0.44
PCDH7O60245 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH7O60245 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH7O60245 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH7O60245 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH7O60245 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH7O60245 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH7O60245 TMEM191A-211ENST00000637163 1067 ntBASIC17.78■□□□□ 0.44
PCDH7O60245 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH7O60245 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH7O60245 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
PCDH7O60245 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH7O60245 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH7O60245 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH7O60245 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
PCDH7O60245 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH7O60245 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH7O60245 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms