Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD6O43541 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD6O43541 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMAD6O43541 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD6O43541 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SMAD6O43541 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.79■□□□□ 0.6
SMAD6O43541 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.79■□□□□ 0.6
SMAD6O43541 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMAD6O43541 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.79■□□□□ 0.6
SMAD6O43541 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SMAD6O43541 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.79■□□□□ 0.6
SMAD6O43541 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SMAD6O43541 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.79■□□□□ 0.6
SMAD6O43541 AL136038.3-201ENST00000561909 1096 ntBASIC18.79■□□□□ 0.6
SMAD6O43541 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD6O43541 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD6O43541 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD6O43541 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD6O43541 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.79■□□□□ 0.6
SMAD6O43541 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD6O43541 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD6O43541 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD6O43541 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD6O43541 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD6O43541 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD6O43541 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD6O43541 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD6O43541 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD6O43541 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.79■□□□□ 0.6
SMAD6O43541 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMAD6O43541 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD6O43541 AL391807.1-203ENST00000604392 2365 ntBASIC18.78■□□□□ 0.6
SMAD6O43541 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD6O43541 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD6O43541 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD6O43541 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
SMAD6O43541 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.78■□□□□ 0.6
SMAD6O43541 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.78■□□□□ 0.6
SMAD6O43541 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SMAD6O43541 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.78■□□□□ 0.6
SMAD6O43541 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.78■□□□□ 0.6
SMAD6O43541 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SMAD6O43541 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD6O43541 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD6O43541 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD6O43541 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.78■□□□□ 0.6
SMAD6O43541 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.78■□□□□ 0.6
SMAD6O43541 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD6O43541 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD6O43541 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMAD6O43541 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.78■□□□□ 0.6
SMAD6O43541 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
SMAD6O43541 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.78■□□□□ 0.6
SMAD6O43541 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SMAD6O43541 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.78■□□□□ 0.6
SMAD6O43541 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD6O43541 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD6O43541 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
SMAD6O43541 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD6O43541 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.77■□□□□ 0.6
SMAD6O43541 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD6O43541 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD6O43541 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD6O43541 AC098818.2-201ENST00000564925 2320 ntBASIC18.77■□□□□ 0.6
SMAD6O43541 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.77■□□□□ 0.6
SMAD6O43541 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD6O43541 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD6O43541 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
SMAD6O43541 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD6O43541 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD6O43541 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.77■□□□□ 0.6
SMAD6O43541 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD6O43541 HLA-F-220ENST00000434407 884 ntBASIC18.77■□□□□ 0.6
SMAD6O43541 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD6O43541 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD6O43541 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.77■□□□□ 0.6
SMAD6O43541 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.77■□□□□ 0.6
SMAD6O43541 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.77■□□□□ 0.6
SMAD6O43541 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SMAD6O43541 AL136038.4-201ENST00000603606 1261 ntBASIC18.77■□□□□ 0.6
SMAD6O43541 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.77■□□□□ 0.6
SMAD6O43541 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.77■□□□□ 0.6
SMAD6O43541 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD6O43541 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.77■□□□□ 0.6
SMAD6O43541 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMAD6O43541 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.77■□□□□ 0.6
SMAD6O43541 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.77■□□□□ 0.6
SMAD6O43541 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.77■□□□□ 0.6
SMAD6O43541 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMAD6O43541 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
SMAD6O43541 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.77■□□□□ 0.59
SMAD6O43541 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.77■□□□□ 0.59
SMAD6O43541 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD6O43541 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SMAD6O43541 CROCCP3-202ENST00000420820 1947 ntBASIC18.76■□□□□ 0.59
SMAD6O43541 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD6O43541 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD6O43541 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD6O43541 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMAD6O43541 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms