Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN3O15551 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLDN3O15551 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN3O15551 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN3O15551 AC092647.4-201ENST00000457211 535 ntBASIC20.34■□□□□ 0.85
CLDN3O15551 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CLDN3O15551 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.34■□□□□ 0.85
CLDN3O15551 AC022616.7-201ENST00000525383 220 ntBASIC20.34■□□□□ 0.85
CLDN3O15551 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN3O15551 LINC01238-205ENST00000567549 1107 ntBASIC20.34■□□□□ 0.85
CLDN3O15551 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN3O15551 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CLDN3O15551 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN3O15551 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN3O15551 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN3O15551 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN3O15551 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN3O15551 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN3O15551 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLDN3O15551 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN3O15551 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN3O15551 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN3O15551 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN3O15551 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN3O15551 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.33■□□□□ 0.85
CLDN3O15551 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CLDN3O15551 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN3O15551 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CLDN3O15551 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN3O15551 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN3O15551 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN3O15551 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CLDN3O15551 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CLDN3O15551 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN3O15551 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN3O15551 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.33■□□□□ 0.85
CLDN3O15551 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN3O15551 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN3O15551 HOMER2P1-201ENST00000455653 964 ntBASIC20.33■□□□□ 0.85
CLDN3O15551 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN3O15551 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN3O15551 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.33■□□□□ 0.85
CLDN3O15551 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CLDN3O15551 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN3O15551 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.33■□□□□ 0.84
CLDN3O15551 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.33■□□□□ 0.84
CLDN3O15551 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN3O15551 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.33■□□□□ 0.84
CLDN3O15551 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.33■□□□□ 0.84
CLDN3O15551 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN3O15551 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN3O15551 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.33■□□□□ 0.84
CLDN3O15551 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.33■□□□□ 0.84
CLDN3O15551 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CLDN3O15551 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.33■□□□□ 0.84
CLDN3O15551 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN3O15551 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN3O15551 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN3O15551 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN3O15551 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN3O15551 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.32■□□□□ 0.84
CLDN3O15551 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN3O15551 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.32■□□□□ 0.84
CLDN3O15551 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN3O15551 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN3O15551 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN3O15551 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.32■□□□□ 0.84
CLDN3O15551 FAM8A6P-201ENST00000407496 1135 ntBASIC20.32■□□□□ 0.84
CLDN3O15551 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN3O15551 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN3O15551 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN3O15551 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN3O15551 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN3O15551 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN3O15551 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN3O15551 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN3O15551 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN3O15551 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN3O15551 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLDN3O15551 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN3O15551 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CLDN3O15551 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN3O15551 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN3O15551 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN3O15551 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN3O15551 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN3O15551 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CLDN3O15551 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN3O15551 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.31■□□□□ 0.84
CLDN3O15551 SEC1P-202ENST00000473944 940 ntBASIC20.31■□□□□ 0.84
CLDN3O15551 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN3O15551 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.31■□□□□ 0.84
CLDN3O15551 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.31■□□□□ 0.84
CLDN3O15551 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CLDN3O15551 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.31■□□□□ 0.84
CLDN3O15551 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN3O15551 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN3O15551 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
CLDN3O15551 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLDN3O15551 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms